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SCN18_25_1_16_R2_B_scaffold_3562_5

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(4428..4907)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003771119 similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 170.0
  • Bit_score: 117
  • Evalue 8.70e-24
DNA-binding protein HU {ECO:0000313|EMBL:ELP61469.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 167.0
  • Bit_score: 114
  • Evalue 7.90e-23
putative histone-like DNA binding protein similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 173.0
  • Bit_score: 109
  • Evalue 6.70e-22

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGTCAGCAAGTCGCAGCTCGCCCAGCGCATCGCGGCGCGGGGCGCCACGCCGGCCCAGGCCGCCCACGCGGTCGACGCCGTGCTCGGGGAGATCACCGCCGCCCTGGCGGCGGGGGAGAAGGTGACGCTCGTCGGCTTCGGCTCGTTCGAGCCCGTCGCCCGCGGCGCCCGCACGGCGCGCAACCCCCGCACCGGCGAGACGGTTCCGGTGGCCGCTACGACGGTGCCGCGGTTCCACCCCGGTGCCGGGCTCCGCACCGCGGTGGACGGCGGCGGGACGTCGCTGCGCCCCGTCGGCTCGCTCGCGGACGGCTACGCGTCGCTCGTCGTGCCCGAGGCGCCGGCGAAGGCGGCGCGGCCGGCCAAGCCGGCGAAGCCCGCGCCCAAGAAGGTCGCCAAGGCCGCCAAGCCGGCGGCGAAGGACGACAAGCACAAGGGCAAGGACGCCAAGGGCAAGAAGTCGGGCAAGAAGAAGTAG
PROTEIN sequence
Length: 160
MVSKSQLAQRIAARGATPAQAAHAVDAVLGEITAALAAGEKVTLVGFGSFEPVARGARTARNPRTGETVPVAATTVPRFHPGAGLRTAVDGGGTSLRPVGSLADGYASLVVPEAPAKAARPAKPAKPAPKKVAKAAKPAAKDDKHKGKDAKGKKSGKKK*