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SCN18_25_1_16_R2_B_scaffold_8091_3

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(2339..3040)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory proteins, AttJ n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CN26_METED similarity UNIREF
DB: UNIREF100
  • Identity: 30.4
  • Coverage: 230.0
  • Bit_score: 77
  • Evalue 1.90e-11
Regulatory proteins, AttJ similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 230.0
  • Bit_score: 77
  • Evalue 5.40e-12
Regulatory proteins, AttJ {ECO:0000313|EMBL:CAX17056.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.4
  • Coverage: 230.0
  • Bit_score: 77
  • Evalue 2.70e-11

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 702
CTCACCGAGCTCGCACGGGCCGACGGGCAGAGCCTCAGCGACCTGGCGGGTCATGTGCGCCTGCCGAAGAGCACCGCGTTCGACGTCTGCTCCGGGCTGGCGGCCCACGAGCTGCTCACCCGCGACTCGGACGGCCGCTACCACCTGGGTCGTCACATCGAGACGCTGGCCAGCAGTTGGGTCGACGGCACGTCCGCCCTGCAGCGGTTCGCCCGCGTCTGCGCCACCCAGGACGAGCTCGACGGCAAGACCGTGACGCTGCACACGCTCGCCGGCAGCTCCGTGCTGTGCCTCGACGTGCGGCTCGGGACCCAACCTTTGCCCGAAACGCCGCGGCCCGGTGTCCGGCTCGGTCTCACCGACAGCGGACCGGGCGCAGCGATCCTGACCGCGGCGACCGACGAGGAGCTCGACGCACTGTTGAGACGCGCGGCGGGCTTCGAAGGCCTCGCAACGCAGGAAATCGCGGCGATCCGAGCCGTAGGCGCACAGTTCCGGCGCGGACGTCGTGCCGTCCCGAGCCCGGACGGCACCGTCGCACTCGCCCGCGCCCGAGCCGCAGGCGAGGGTCGGAGCTGGCTCGCGGTCGCCGTGCTCCTGCCGGCCCGGAACGGCTCCCCCGGGAGCGAGGGTGTCGTCGCCGCAATCGAGCGAGTCCTGGACGCCCTGGTCGGTGCCGTTGGAGCGACACTCGCGCCCTGA
PROTEIN sequence
Length: 234
LTELARADGQSLSDLAGHVRLPKSTAFDVCSGLAAHELLTRDSDGRYHLGRHIETLASSWVDGTSALQRFARVCATQDELDGKTVTLHTLAGSSVLCLDVRLGTQPLPETPRPGVRLGLTDSGPGAAILTAATDEELDALLRRAAGFEGLATQEIAAIRAVGAQFRRGRRAVPSPDGTVALARARAAGEGRSWLAVAVLLPARNGSPGSEGVVAAIERVLDALVGAVGATLAP*