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SCN18_25_1_16_R2_B_scaffold_7911_1

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(3..929)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion exporter n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZB2_CELFA similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 309.0
  • Bit_score: 361
  • Evalue 5.10e-97
type III secretion exporter similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 309.0
  • Bit_score: 361
  • Evalue 1.50e-97
Type III secretion exporter {ECO:0000313|EMBL:AEE44833.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 309.0
  • Bit_score: 361
  • Evalue 7.20e-97

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 927
GTGAGCGACGCCCAGGAGCGGAGCTTCAAGGCGTCCGACCGCCACCTCAAGGAGGTGCGCCGGCAGGGGCGCCTCGGACGGTCGCAGGACCTGCAGGCCTGGGTGGGGCTCGGCGCCGCCGCCCTCATGCTGCCGGTCGTCGCGGCGCGCGCCCGGGAGACCGCTGGCGCCTCCCTCACCGGGCTCGCGGGCGTCGCCCGGGAGCCCGACCCCGCCGCCGCGGTCCGCGTCCTGTTCGACGCCCTGCAGGGCGTGCTGTCCGCGATGCTGCCGATGTTCGCCGTCACGGTCGTGGCGGTCGTCGCCGTCGCGGTGGCCCAGGGCGGGGTCCACCTGCGCTCGTTCAAGCCGCAGCCGCAGCAGTTCAGCCCGCTCACGGGCATCCGGCGGCTGGTCGGGGCGCAGGCCTGGTGGCAGGCGGCGAAGGTGCTGCTGAAGTCCGCGGCGGTGGGCCTGGTGATGTACGCCACCGTGCAGGCGCTGGCGCCGACCCTCATGGCCTCGGGCCGGCTGCCGCTGTCCGGCGTGCTGTCCGCGGCGGCCGGGGGCACGACGAGCCTGCTCCGCTCGGGGATCGTCGCGGGCGTGCTGCTCGCCCTGGTCGACCTCGCCGTGGTGCTGCGGCGCAACCGCAAGCAGACGCGCATGACGCTGCGCGAGGTCAAGGACGAGCACAAGCGATCCGAGGGCGACCCGCACGTCAAGGCCGCGATCCGCGGCCGCCAGCAGCAGCTCTCCCGCAACCGGATGATGGCGGCGGTCGCCGAGGCCGACGTGGTGCTCGTCAACCCGACGCACGTCTCGGTGGCGCTGCGCTACGAGCCGGGCCGGGGTGCGCCTCGCGTCGTGGCGAAGGGCTCCGGCGAGATGGCGGCCCGCATCCGCGCGCGCGCGTCGGAGCACCACGTGCCGCTGGTGGAGGACGTC
PROTEIN sequence
Length: 309
VSDAQERSFKASDRHLKEVRRQGRLGRSQDLQAWVGLGAAALMLPVVAARARETAGASLTGLAGVAREPDPAAAVRVLFDALQGVLSAMLPMFAVTVVAVVAVAVAQGGVHLRSFKPQPQQFSPLTGIRRLVGAQAWWQAAKVLLKSAAVGLVMYATVQALAPTLMASGRLPLSGVLSAAAGGTTSLLRSGIVAGVLLALVDLAVVLRRNRKQTRMTLREVKDEHKRSEGDPHVKAAIRGRQQQLSRNRMMAAVAEADVVLVNPTHVSVALRYEPGRGAPRVVAKGSGEMAARIRARASEHHVPLVEDV