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SCN18_25_1_16_R2_B_scaffold_11269_3

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(1746..2354)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7L5_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 205.0
  • Bit_score: 177
  • Evalue 1.20e-41
Uncharacterized protein {ECO:0000313|EMBL:KIE39442.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 205.0
  • Bit_score: 180
  • Evalue 1.50e-42
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 205.0
  • Bit_score: 177
  • Evalue 3.30e-42

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
GCGGCGGCGCGGATCCGGGCCGCCGCCATGCGGCTGTTCGCCGAGAAGGGCTTTGCCGCGACCTCGATCCGCGAGGTCGCAGCGGCGGCCGGGGTCTCGTCGTCCCTGGTCGTCCATCACTTCGGCAGCAAGGCTCAGCTCAAGGCCGCGACCGACGCACGGCTGATCAGCAGCCTCACGTCGCTGCTGTCGGAGCTGCCCACGACCGAAGGCGCCGACTTCAACCAGGCGGCCGGGTCCCTTGCGGCCATGCTGCGGGACGAACCGGACCTCCTCGGCTACCTGCGCCGCACGCTGGTGGACGGCGGCGAGGCGGCGAGCTCGCTGTTCCTCGGACTCGTGGAGGCGACGATCGCCGAGCTCGCGGCCCAGGAGGTGGCCGGGGTGCTGCGGCCGTCGGTCGACCCGCGCGCACGAGCGGTGTTCTTGCTGGTCAACGACCTGGGCCAGATCGTGCTGCGCGACCTGGTGGCGCAGGCGATCGGCGCGGACCCGCTCAGCCCCGACGGCATCCGCACGCTGGGCGCCGTCCTCATGGAGGTCTACACGGGCGGCATCTACGCCACCGACGCACCACGGCCGACTGCCGGGGGCGGGGAGAGGAGCTGA
PROTEIN sequence
Length: 203
AAARIRAAAMRLFAEKGFAATSIREVAAAAGVSSSLVVHHFGSKAQLKAATDARLISSLTSLLSELPTTEGADFNQAAGSLAAMLRDEPDLLGYLRRTLVDGGEAASSLFLGLVEATIAELAAQEVAGVLRPSVDPRARAVFLLVNDLGQIVLRDLVAQAIGADPLSPDGIRTLGAVLMEVYTGGIYATDAPRPTAGGGERS*