ggKbase home page

SCN18_25_1_16_R2_B_scaffold_6596_1

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 2..1357

Top 3 Functional Annotations

Value Algorithm Source
Prophage LambdaBa04, site-specific recombinase, phage integrase family n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GHY7_PROFC similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 444.0
  • Bit_score: 283
  • Evalue 3.40e-73
Uncharacterized protein {ECO:0000313|EMBL:KHJ71359.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 422.0
  • Bit_score: 295
  • Evalue 9.20e-77
int; site-specific recombinase similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 444.0
  • Bit_score: 283
  • Evalue 9.60e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1356
GCGGCTTTGGTGACGATTGCCCCACTCCGAGCGCCACCGAGACGCGGCGCTGCCGCACATGTACCGGGCATGACACGTTCCAACGGCCGCAAGAGTCGCCGTCGCGGCGCAGGTGAAGGCAGCATCGGCTCGTACGAGACCAAGGGCGGTCGGCGGTACCGCGCGCTCTGGCACGAGCCGATCGACATCGACGACCCGGACGCCGGCAAGCGGCTGGCATCAAAAGGTGGCTTCGTCGAGCAGAAGGAGGCCATCTCGTACCTGCGTCGGGTCTTGACCGACCTCGACGAGGGCAAGCTGACCAGGTCGAAGGAAACAACCTTCGGAGAGTTCGCCGCCACGTGGCTCGACGGCTTTCGAGGCGCAGCCACCACGAAGGCCGGCTATCGGAGGTTGCTGCGCCTTCACGTCTTGCCCACGCTCGGCCCCGTTCCGCTGAAGGCCATCCGGCCGACGACACTCGCTTCGCTCTACCAGCGGCTTGAGGACGGCACGGCAGCCGTCGAGGACGGGGACGAGCAACCCCGAGAGCCGATTGGTCCCAACACCGTTCGCAAGTGCCACACGCTGATCGGCGCGATCTTGCAGGCCGCGGTCGACGACAACCTCCTCGCCACCAACTCCGCGCGCTATCGGCGTGCCAACCCTCCGACGGCACGCGAGGTCCGTTCCGCCAAGCCCGAGATCACACCGTGGCGGGCCGAGGAGCTCAGGCTCTTCCTGAACTGGGTGGTCGACGAGGAGATCGATCCGTTGCGCTACGCCTGGGTTGTCGCCGCTCACACCGGCGTCCGCCGAGGTGAGCTGCTCGGGCTGCGATGGGGGGACATCGACCTGGTTGCTGGGTCGATCTCTGTCCGACGCTCGCGGGTCCAGGTGCGAGAGAAGGGCCAGGTGACGCGGGACGTCGAGTCGGTGCCGAAGAGCGCCGGAGGCCACGCGGGCACCCACCCGATCGACATCGATGACGCAGCGGTAGCGGCACTCCGGGCCCAGCTGCGGTTGATGTCGTACCTCGATCCTCGACTCGTGGCCCGGGACAAGCCCGTGTTCGTCGGGGCAGACGGGAAGATGTTCGTGTCGGACCAGGTCACGAAGCGATTCGGTGCAGCAGTGCGGCGCTACAACGAGCAGGCTTCGGCGCCTGAGCAGATTCCACTCATCCGCCTCCATGACCTGCGGCACACGCACGCGACGCTCCTCCTCGAGGCCGGCGTGCACCCGAAGGTCGTGCAGGAGCGCCTCGGGCACTCGACGATCGCGATCACGATGGATCTGTACAGCCACGTGCTCCCGACGACACAGCGGGCGGCGGCGGACGCCTTCGGTCGGTTGTCCCAAGCCCCGGAGGCCTAG
PROTEIN sequence
Length: 452
AALVTIAPLRAPPRRGAAAHVPGMTRSNGRKSRRRGAGEGSIGSYETKGGRRYRALWHEPIDIDDPDAGKRLASKGGFVEQKEAISYLRRVLTDLDEGKLTRSKETTFGEFAATWLDGFRGAATTKAGYRRLLRLHVLPTLGPVPLKAIRPTTLASLYQRLEDGTAAVEDGDEQPREPIGPNTVRKCHTLIGAILQAAVDDNLLATNSARYRRANPPTAREVRSAKPEITPWRAEELRLFLNWVVDEEIDPLRYAWVVAAHTGVRRGELLGLRWGDIDLVAGSISVRRSRVQVREKGQVTRDVESVPKSAGGHAGTHPIDIDDAAVAALRAQLRLMSYLDPRLVARDKPVFVGADGKMFVSDQVTKRFGAAVRRYNEQASAPEQIPLIRLHDLRHTHATLLLEAGVHPKVVQERLGHSTIAITMDLYSHVLPTTQRAAADAFGRLSQAPEA*