ggKbase home page

SCN18_25_1_16_R2_B_scaffold_6691_4

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(1425..1844)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 132.0
  • Bit_score: 147
  • Evalue 9.60e-33
Ribonuclease VapC n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C0G1_XYLCX similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 132.0
  • Bit_score: 147
  • Evalue 6.80e-33
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 132.0
  • Bit_score: 147
  • Evalue 1.90e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GTGACCCTGGTGCTGGACGCGTCCGTGCTCCACGACCACCTGCTCGGAGGCCGACGAGCGCCGCTCGTCGCCTCGGCCGTCCGCGCGCACGACGGTGACGTGAACATCCCTCACATCGCGATCGTCGAGACCCTCTCGGTCCTGCGTCGGCTGACGCACCAGGGGCTGCTCACGGTCGCACGCGCACGGCTGGCGCTCACGGACCTGGTTGACGCACCGTTCACGCGCTGGCCTGCCGATGCGCTGCTGCCCCGGATCTGGGAGCTCCGGGCCAACCTCAGCGCCTACGACGCGACGTACGTCGCCCTCGCGGAGTCCCTCGACGCGACGCTGCTCACCGCGGATGCGCGGTTGGCCCACGCCTGCGCGCGCCACGCGCGATGCAGCGTCTCGCTCGTGGCGGCGCCGACCGAGGCCTGA
PROTEIN sequence
Length: 140
VTLVLDASVLHDHLLGGRRAPLVASAVRAHDGDVNIPHIAIVETLSVLRRLTHQGLLTVARARLALTDLVDAPFTRWPADALLPRIWELRANLSAYDATYVALAESLDATLLTADARLAHACARHARCSVSLVAAPTEA*