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SCN18_25_1_16_R2_B_scaffold_12497_5

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 2284..3081

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=1 Tax=Rhodococcus opacus M213 RepID=K8XMI4_RHOOP similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 259.0
  • Bit_score: 180
  • Evalue 1.80e-42
IclR family transcriptional regulator {ECO:0000313|EMBL:EKT78290.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 259.0
  • Bit_score: 180
  • Evalue 2.50e-42
transcriptional regulator, IclR family similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 260.0
  • Bit_score: 151
  • Evalue 2.60e-34

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 798
TTGTCCAACCTCAGTCGCGCGATGTCCATCCTGGAGGCCCTGGCGGACGATCCTGCTGGCGTGCGGGTCACCGACCTGGCCGAGCAGATGAACGTCAATCGGGCCATTCCGCACCGACTGCTCACTGAGCTGTGCGAGCTCGGCTACGTCGTCCAGGATCCGGACAGTGAGCGCTACCGGGCCACGCTGAAGGTGGGCAGCTTAGGACTGCGGGAGCTCGAGCGGGCGAACGTCATGGACTGGGCCCAGGAAGGTCTGGCGCGTCTGGCTGCGCAGTCCCAGGAGTTGGCGCGCGTGTCGATCGCGTCGAACTCGACGCTGCGCTTCGTCGCCCAGGCGCAAGGCGCCAGCGGCTCACTGATCGTCAACAGCCCGCTGCGCGCCGAGCTCGCCCTCCACGCGACGGCCTCTGGCAAGGCGTTCCTGTCTACCCTGCCGTGGGACGAGGTGAAGGAGATCCTCGGCCGACGCGGAATGCCGGGATTGACGGTGGAAACCCACACCGACCTCAGGTTCCTCCAGGAGGACTTGGCCAAGGTACGGGCCGACGGCTTCGCGATCGTCGAGGAGGAGGCCGAGCAAGGGATCAGTGCGGTGGCCGTGGCGATCGTGCCGCCGCAGTCACCCCTGGCGCGGGCGGTCGGGTCTGTCAGCGTTGCCGGCCCCAACGTGCGCCTGACGCTGCCCAGGCTGCGAGACCTGGCGCCCACCGTCGCGGAGACGGCCGACCGGCTGGCGAGGACGTGGCACGTGTTCGAGTACTTGAGAGCGGTGTCAGAGCCGCCGTCCAGGTTGTGA
PROTEIN sequence
Length: 266
LSNLSRAMSILEALADDPAGVRVTDLAEQMNVNRAIPHRLLTELCELGYVVQDPDSERYRATLKVGSLGLRELERANVMDWAQEGLARLAAQSQELARVSIASNSTLRFVAQAQGASGSLIVNSPLRAELALHATASGKAFLSTLPWDEVKEILGRRGMPGLTVETHTDLRFLQEDLAKVRADGFAIVEEEAEQGISAVAVAIVPPQSPLARAVGSVSVAGPNVRLTLPRLRDLAPTVAETADRLARTWHVFEYLRAVSEPPSRL*