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SCN18_25_1_16_R2_B_scaffold_10139_2

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 592..1599

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 336.0
  • Bit_score: 603
  • Evalue 1.20e-169
DNA-directed RNA polymerase subunit alpha n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1Z6_CELFA similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 336.0
  • Bit_score: 603
  • Evalue 8.40e-170
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 336.0
  • Bit_score: 603
  • Evalue 2.40e-170

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
GTGCTCATCGCACAGCGCCCCACCCTGACCGAAGAGGTCATCTCGGAGTACCGCTCCCGGTTCTCCATCGAGCCGCTCGAGCCGGGCTTCGGCTACACGCTCGGCAACTCGCTGCGTCGCACGCTGCTCTCGTCCATCCCGGGCGCGGCCGTGACGAGCATCCGCATCGACGGCGTGCTGCACGAGTTCTCGACGGTTCCGGGCGTCAAGGAGGACGTCACCGAGCTCATCCTCAACATCAAGAGCCTCGTGGTGTCGTCGGAGAACGACGAGCCCGTGGTGATGTACCTGCGCAAGCAGGGTGCCGGCGAGGTGACCGCGGCGGACATCGTGCCGCCGGCCGGTGTCGAGGTGCACAACTCCGACCTGCACCTGGCGACCCTCAACGACAAGGGCAAGCTCGAGATCGAGCTGACCGTCGAGCGCGGCCGCGGCTACGTCTCGGCCAGCCAGAACAAGTCGATGGACGCGGAGATCGGCCGGATCCCGGTCGACTCGATCTACTCGCCGGTGCTCAAGGTGACGTACAAGGTCGAGGCGACCCGCGTCGAGCAGCGCACCGACTTCGACAAGCTGGTCGTCGACGTCGAGACCAAGCCGGCGATCAGCCCGCGGGACGCGCTGGCCTCGGCCGGCAAGACCCTGGTCGAGCTGTTCGGCCTCGCCCGCGAGCTCAACGCCGGGGCGGAGGGCATCGAGATCGGCCCGTCGCCGACGGACGCGGCCCTCGCCGCGGACCTGGCGCTGCCGATCGAGGACCTGCAGCTGACGATCCGTTCGTACAACTGCCTCAAGCGCGAGGGCATCCACACGGTGGGCGAGCTCGTCGCCCGCTCGGAGGCCGACCTGCTCGACATCCGCAACTTCGGTGCCAAGTCGATCACCGAGGTCAAGGAGAAGCTGGCCGAGCTGGGCCTGGCGCTCAAGGACAGCCCGCTGGACTTCGCGACCGGCGACGCCTACTACGGCGACGACGAGGCGGACTTCTCGGACGACGAGCAGTACTGA
PROTEIN sequence
Length: 336
VLIAQRPTLTEEVISEYRSRFSIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVLHEFSTVPGVKEDVTELILNIKSLVVSSENDEPVVMYLRKQGAGEVTAADIVPPAGVEVHNSDLHLATLNDKGKLEIELTVERGRGYVSASQNKSMDAEIGRIPVDSIYSPVLKVTYKVEATRVEQRTDFDKLVVDVETKPAISPRDALASAGKTLVELFGLARELNAGAEGIEIGPSPTDAALAADLALPIEDLQLTIRSYNCLKREGIHTVGELVARSEADLLDIRNFGAKSITEVKEKLAELGLALKDSPLDFATGDAYYGDDEADFSDDEQY*