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SCN18_25_1_16_R2_B_scaffold_12158_2

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(1294..2217)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B7138E similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 289.0
  • Bit_score: 385
  • Evalue 4.30e-104
Periplasmic binding protein-like domain {ECO:0000313|EMBL:AGU11901.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 289.0
  • Bit_score: 352
  • Evalue 4.30e-94
HTH-type transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 286.0
  • Bit_score: 164
  • Evalue 4.40e-38

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
GCCGGCCGGGCGCTGCGCCGCCAGCGGGCCGGGGCGATCGCGCTCATCGTGCCGAACACCTCGCACCACGTCTTCGGCCACACCTACTTCATGCACGTCCTCACCGGGGTCTCCAGCTCGGCCAACGCCCACGACGTCCAGGTGATCGTCTCGACGAACGCCGACGAGGCGGGCCGGGCCAGCGCGTTCGAGCGGATCATCCGCTCGGGCACCGCCGACGGCGTCATCGTCACCGCCGCCCCGGTCGACGACGCCAACGTCGAGACCCTCGTCGCCTCCGGGCTGCCCGTCGTCCTCCTCGGCAACTTCCCCTACCTGCCCGAGGCGACCAGCGTCGGCGCGGACGACGTCGCCGCCAGCCGGCTCGTCACCGAGCACCTCCTCACCGTGCACGGGCGCACCCGGCTGCTGCACGTCTCCGGCCCCCTCGACCACCAGACCGGCATCGACCGGCGGGAGGGCTTCCTCTCCGCGCTCGCCGGGCACGGGCTGGCCGACGAGGCCTGGGTCGTCGAGGGCGACATGAGCGAGGAGTCCGGCGCGGCCGCCGTCGTGGCGGCCCTCGACAGCGGGCGGCCGTTCGACGGCGCGGTGTTCGCCAACGACGACATGGCGTTCGGCGCGATGCAGGTGCTGCGCGCCCGCGGGCTCGACGTCCCGACAGACGTCGCCGTCGTCGGCTTCGACGACTTCGGCCTCGCCCGGACCACCACCCCCGGCATCACCACCATGCGGGTGTCCGCCGAGCAGATGGCCCGGATCGACACCGACACCCTCTTCGCGATCCTCGCGGGCCAGCAGGCGGGCCCGCTGCACCAGGAGCTGCCCGTGCAGCTCGTCACCCGAGACTCCGGCGGCTGCCCCGCCCCGTTCCCGCGAGGCCAGGCAGCCGCCCCCTGGGCCGACACCGCCGTCACGCCCTGA
PROTEIN sequence
Length: 308
AGRALRRQRAGAIALIVPNTSHHVFGHTYFMHVLTGVSSSANAHDVQVIVSTNADEAGRASAFERIIRSGTADGVIVTAAPVDDANVETLVASGLPVVLLGNFPYLPEATSVGADDVAASRLVTEHLLTVHGRTRLLHVSGPLDHQTGIDRREGFLSALAGHGLADEAWVVEGDMSEESGAAAVVAALDSGRPFDGAVFANDDMAFGAMQVLRARGLDVPTDVAVVGFDDFGLARTTTPGITTMRVSAEQMARIDTDTLFAILAGQQAGPLHQELPVQLVTRDSGGCPAPFPRGQAAAPWADTAVTP*