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SCN18_25_1_16_R2_B_scaffold_12210_1

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(74..1273)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator (Fragment) n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JPK2_STRRC similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 379.0
  • Bit_score: 682
  • Evalue 1.70e-193
Transcriptional regulator {ECO:0000313|EMBL:EST18764.1}; Flags: Fragment;; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 379.0
  • Bit_score: 682
  • Evalue 2.40e-193
transposase, IS30 family similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 400.0
  • Bit_score: 656
  • Evalue 3.70e-186

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGCGTCCGTTCGATCCGAAGCCGCCCACGGGCCGGTATCTGTCGTTTCGTGAGCGGGAGGAGATCGCGCTGCTGAAGGTCCAGGGCAAGGGCGTGCGACAGATCGCTCGAACCGTCGGCCGTGACCCCGGGACGGTCTCTCGCGAGCTGCGACGCAACGCCGCCACTCGAGGCGGGAAGCTGGAGTATCGGGCGTCGGTGGCGCAGTGGAAGGCCGACCTGGCTGCCCGCCGGCCGAAGACGGCCAAGCTGGTGGTCAACCCCCAGTTGCGTGCGTACGTGCAGCAGCGGCTGTCCGGGCAGATCGGCCGACCCGACGGCACACTGATCGCCGGCCCGGCGACGGGCAGGTGGACCGGTCGGAACAAGCCGCACCGCAAGGATCGTGCCTGGGTGCAGGCGTGGAGCCCGGAGCAGATCGCCAACCGGATCAAGGTCGACTTCCCCGACGATGAATCCATGCGCATCAGCCACGAGGCGATCTACCAGGCGCTCTACATTCAGGCCCGCGGCGCACTCAAGCGCGAGCTCATCTTGTGCTTGCGAACCGGCCGGGCGCTGCGCGCACCCCGAGCTCGTTCGCGTCGCAAGACCTGGGCGCACGTTACGCCCGAAGCCCTCCTCAGTGAGCGGCCCGCCGAAGCCGCCGACCGCGCCGTTCCCGGCCACTGGGAAGGCGACTTGATCATCGGGCTGGAGCGCTCGGCGATCGGCACCGTCGTGGAGCGGACGACCCGGTTCACGATGTTGGTCCATCTGCCCCGCGAGGCCGGATACGGCGTGATCCCACGCACGAAGAACGGCCCCCCGCTGGCCGGCTACGGAGCGATCGCGATGAAGAACGCCCTCGCGGACACCATGTCCAGGCTGCCAGCACAGCTGGCGCGGTCGCTGACCTGGGACCGCGGCAAGGAACTGTCGGCGCACGCCCAGTTCAAGGTCGAGACCGGCATCCCCGTCTTCTTCGCCGACCCGCACAGTCCCTGGCAGCGGGGCACGAACGAGAACACCAACGGCCTCCTGCGCCAGTACTTCCCCAAGGGCACCGACCTCTCGCGCTGGTCCGCCGAGGAGATCCATGCCGTCGCCCACGCCCTGAACACCCGACCCCGCAAGACGCTCGGCTGGAAGACGCCGGCCGAGGCGCTCAACGAGCACCTACTGTTGCTCCAACAAGCCGGTGTTGCATCGACCAGTTGA
PROTEIN sequence
Length: 400
MRPFDPKPPTGRYLSFREREEIALLKVQGKGVRQIARTVGRDPGTVSRELRRNAATRGGKLEYRASVAQWKADLAARRPKTAKLVVNPQLRAYVQQRLSGQIGRPDGTLIAGPATGRWTGRNKPHRKDRAWVQAWSPEQIANRIKVDFPDDESMRISHEAIYQALYIQARGALKRELILCLRTGRALRAPRARSRRKTWAHVTPEALLSERPAEAADRAVPGHWEGDLIIGLERSAIGTVVERTTRFTMLVHLPREAGYGVIPRTKNGPPLAGYGAIAMKNALADTMSRLPAQLARSLTWDRGKELSAHAQFKVETGIPVFFADPHSPWQRGTNENTNGLLRQYFPKGTDLSRWSAEEIHAVAHALNTRPRKTLGWKTPAEALNEHLLLLQQAGVASTS*