ggKbase home page

SCN18_25_1_16_R2_B_scaffold_10585_3

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(1599..2474)

Top 3 Functional Annotations

Value Algorithm Source
WD40 repeat-containing protein n=1 Tax=Frankia sp. CN3 RepID=G6H360_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 193.0
  • Bit_score: 162
  • Evalue 5.60e-37
Uncharacterized protein {ECO:0000313|EMBL:KGM15092.1}; Flags: Fragment;; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 296.0
  • Bit_score: 286
  • Evalue 3.60e-74
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 286.0
  • Bit_score: 151
  • Evalue 3.70e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
GCGCCGGGCAAGGGCGTGGATGGCGAGAACGCCCTGGAAGTGGCGGCCGGCGCCGTCCGCTTCGCCCCGGCCAAGGGGGGATATGGTGGCAGCCTGAAGCTGGAGGGGGAGCGGATCGAGATCCTGGCCGATGGCCAGGCGCCGACGGCAGGCTTCGACGGGACTTCGGCCCATGCCCGTGTGTTGAACGGAATCGGGGCGCCCACCCTGGGCGTGGGCGCGCTGCCCACGGCGCCGACCGGGCGGATCGGTGACCTCGGCGGGTTCGTGTACGCCGTCTCGTTCGCGCCCGACGACACGACCCTGGTCGCCTCGGTCCTGTCCGGGCACGTGGACCTGCTCGACGCGAGCGACCTGGCCCACCCCGCCCTCGTCGGCCGGCCGCTGACCGGGCCGAAGGGGTATGTCTACTCCGCGGCCTTCTCCCCCGACGGGCGCACGATCGCCGCCTCGGGCAACGACAAGACGATCTGGCTGTGGGACGTCAGCGACAGGGCGCACCCGCGCGCGCTCGGCGCGCCCCTGGTGTGGGCCGACGGGTACGCCACCAACATCCTGTTCTCCCCCGACGGGCACCGCCTCGCCGCCGGCATGACGGACGGCACCGTACGCGTGTGGGACGTGGCGGACCCCGCGTCCCCGCAGCGCTACGCGTCGCTGACGGGCGTCACCGGCGAGGTGTACGGCGTGGCGTTCTCCACCGACGGGTCGCAGGTCTCCGGGGCCGGCTCGGACCGGACCGTGCGCGTCTGGGACCTCACGACCCAGGCGGCCACCGCGGCCGTCTGCGCACCGGCGCGCGCCGGGCTGACGATGACGGCCGACGAGTGGTCGCGCCTGGCCGGCCCGCTGACGAAACCGACGCTCTGCGGCTGA
PROTEIN sequence
Length: 292
APGKGVDGENALEVAAGAVRFAPAKGGYGGSLKLEGERIEILADGQAPTAGFDGTSAHARVLNGIGAPTLGVGALPTAPTGRIGDLGGFVYAVSFAPDDTTLVASVLSGHVDLLDASDLAHPALVGRPLTGPKGYVYSAAFSPDGRTIAASGNDKTIWLWDVSDRAHPRALGAPLVWADGYATNILFSPDGHRLAAGMTDGTVRVWDVADPASPQRYASLTGVTGEVYGVAFSTDGSQVSGAGSDRTVRVWDLTTQAATAAVCAPARAGLTMTADEWSRLAGPLTKPTLCG*