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SCN18_25_1_16_R2_B_scaffold_10644_2

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 1370..1972

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L651_FRASN similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 198.0
  • Bit_score: 237
  • Evalue 9.40e-60
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 198.0
  • Bit_score: 237
  • Evalue 2.70e-60
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABW16444.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 198.0
  • Bit_score: 237
  • Evalue 1.30e-59

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 603
TTGTCAGAAGCGAGTGATCCGCAGACCACCGGGCTGCGCGAGCGCAAGAAGGCGCGCACGCGGCAGCTGATCCAGGAGCACGGCCTGCGCCTCTTCCGGGAGCAGGGCTACGAGGCCACCACGGTGCAGCAGATCATCGATGCCGCCGAGGTCTCCGAGAGCACCTTCTTCCGGTACTTCCCCACCAAGGCGGAGGTCGTCCTCGTCGACGACTTCGACCCCATCCTCGTCAGCTCGTTCCTCGCACAGCCCCCCGGGCTCACCGCGATCCAGGCGCTGCGCGCGAGCTTCCGCGACACGTTCGGCGCTCTCTCGGACGACGAGACCGCCGCGATGAAGGAACGCAACGAGCTCGTCGTGACCGTGCCCGAGCTGCGGGCCGCGATGCTGGACCAGCTCTCCTCGACGATGCAGGTCCTCGGCGAGGCAGTCGCGCAGCGGACCGGACGCCCGCCGAACGATCCGGCCGTGCGCACCCTGGTGGGAGCCGTGGTGGGGGTGGCGGTGGCCGTCGAGCTCGTGCTCTTCGACGACCCGACCGCGGACCTGGTCGCGCTCCTCGACGAGGCGATGGGTCAGCTGGAGGCGGGCCTCCGGCTCTGA
PROTEIN sequence
Length: 201
LSEASDPQTTGLRERKKARTRQLIQEHGLRLFREQGYEATTVQQIIDAAEVSESTFFRYFPTKAEVVLVDDFDPILVSSFLAQPPGLTAIQALRASFRDTFGALSDDETAAMKERNELVVTVPELRAAMLDQLSSTMQVLGEAVAQRTGRPPNDPAVRTLVGAVVGVAVAVELVLFDDPTADLVALLDEAMGQLEAGLRL*