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SCN18_25_1_16_R2_B_scaffold_12690_2

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(1041..1604)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Amycolatopsis mediterranei (strain S699) RepID=G0G8H0_AMYMS similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 178.0
  • Bit_score: 143
  • Evalue 1.70e-31
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 187.0
  • Bit_score: 144
  • Evalue 2.90e-32
TetR family transcriptional regulator {ECO:0000313|EMBL:AIG73264.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 187.0
  • Bit_score: 144
  • Evalue 1.40e-31

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
GTGAATGACCGTGCGCTGCGCGCCGACGCGCGTGACAACCGAGCGAAGGTCCTCACCGCGGCGCGCTCCGCGTTCGAGGAACTCGGCCCGGAGGCGAATCTGCGAGAGATCGCCCGTCGAGCAGGTGTCGCCCAAGGCACGGTGCATCGGCACTTCCCCACGAAACAGGCGCTCTTCTCCGCGATCGCGGTCGACCGGCTGAAGGAACTGGCCGAACTGGCGCGAGCGCTCGACACCCAGGAGCCGCCGGGGACGGCGTTCCTGGCGTTCGTATCCAAGACGGTCGAGCAGGCGCGCCAGAACCGCTCGCTAGCCGCCGTCTTCGCCGGGGCCGGCAGCGACTCGGCCGTGCAGACGGCGGAGCAGGAGATGAGCACCGCGCTCGAGACGCTCCTTGCTCAAGCGCAAGCAGACGGGACCATCCGCGACGACATCGACCTCGCCGACGTTCACGCCATCACCGCCGCGCTGCTCGCCGTTGACGCCTATCCCGCCTCAAGCGACACCGACCGAAGCCGGCGCATCACTGTGGTGCTCGACGGGCTCCGACCGCGGCGCAGCTGA
PROTEIN sequence
Length: 188
VNDRALRADARDNRAKVLTAARSAFEELGPEANLREIARRAGVAQGTVHRHFPTKQALFSAIAVDRLKELAELARALDTQEPPGTAFLAFVSKTVEQARQNRSLAAVFAGAGSDSAVQTAEQEMSTALETLLAQAQADGTIRDDIDLADVHAITAALLAVDAYPASSDTDRSRRITVVLDGLRPRRS*