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SCN18_25_1_16_R2_B_scaffold_21378_3

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(620..1087)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993}; Short=HMG aldolase {ECO:0000256|RuleBase:RU004338};; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004338};; EC=4.1.3.17 {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993};; Oxaloacetate decarboxylase {ECO:0000256|RuleBase:RU004338}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 154.0
  • Bit_score: 265
  • Evalue 2.70e-68
ribonuclease n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C5804 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 155.0
  • Bit_score: 278
  • Evalue 3.70e-72
ribonuclease activity regulator protein RraA similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 153.0
  • Bit_score: 215
  • Evalue 8.40e-54

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGACCCTCTCGACGGCGGATCTGTACGACGAACGCGGCGACGAGCTCGACTCCCTCGTCCTGCAGCTGCACGACCTCGGCGGCCGGGTCGCCTTCGACGGCCCCGTCCGCACCGTCCGGTGCCATCGCGACAACGCCCTCGTCAAGGCGGTGCTGGCCACTCCCGGCGACGGCGCCGTGCTCGTCGTCGACGGGGGCGGGTCGCTCGAGTCCGCACTCGTCGGCGACCTCATCGCGGCGTCGGCGGTCCGCAACGGGTGGGCCGGGATCATCGTGCACGGCGCGATCCGCGACCGGACCGCCATCGCCGCGCTCCCGATCGGGGTGAAGGCGCTGGGCTCGAACCCGCGGCGCAGCGCGAAGGACGGCGTCGGCGAGGTCGACGTCCCGGTCGTGATCGCCGGTGTGGCATTCGTGCCGGGGCGGCATGTGTGGGCCGACGCGGACGGCATCCTCGTCGAGCGGTGA
PROTEIN sequence
Length: 156
MTLSTADLYDERGDELDSLVLQLHDLGGRVAFDGPVRTVRCHRDNALVKAVLATPGDGAVLVVDGGGSLESALVGDLIAASAVRNGWAGIIVHGAIRDRTAIAALPIGVKALGSNPRRSAKDGVGEVDVPVVIAGVAFVPGRHVWADADGILVER*