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SCN18_25_1_16_R2_B_scaffold_20047_1

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 2..535

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B1309 similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 177.0
  • Bit_score: 279
  • Evalue 1.90e-72
ABC transporter permease {ECO:0000313|EMBL:EYT57678.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 177.0
  • Bit_score: 279
  • Evalue 2.70e-72
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 176.0
  • Bit_score: 274
  • Evalue 1.30e-71

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
TTCTTCGGCCGCAGCGTCGCCTTCGCCGCGCTGGTCGCGGTGATGGCCGTGCCCGGCGTCGTGCTGCTCATCCCGAAGTTCCTGGTCATCAACCAGCTCGGGATCTACAACTCGTTCGTCGGGCTCATCGTGCCGCTCATCGCGGACCCCGCCGGCATCTTCATCCTGAAGAACTTCTTCGAGTCGATCCCCGCCTCGGTCGAGGAGGCGGCACGCATCGACGGCGCCGGGACGTTCCGGTTGTGGTGGTCGATCGTCCTGCCCATGGCGACGCCGGCGCTCATCACCATCACGATCCTGGCGTTCCAGGGCTCGTGGAACGAGCTGTCCCACTTCATCGTCGCGTCGAGCGACGCGCGCCTGTTCACCCTGACCAAGGGCGTCGCGCAGCTGGCCTCGGGCGGCCTGGGCTCGGGCACGCAGTACCCGCTGAAGCTCGCCGCGGCCGCGATCATGACGATCCCCGTCGCCGTGCTCTTCTTCGTCTTCCAGCGCCGCATCATGGGCACCGGCGCGGGCGCGGTGAAGGAGTAG
PROTEIN sequence
Length: 178
FFGRSVAFAALVAVMAVPGVVLLIPKFLVINQLGIYNSFVGLIVPLIADPAGIFILKNFFESIPASVEEAARIDGAGTFRLWWSIVLPMATPALITITILAFQGSWNELSHFIVASSDARLFTLTKGVAQLASGGLGSGTQYPLKLAAAAIMTIPVAVLFFVFQRRIMGTGAGAVKE*