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SCN18_25_1_16_R2_B_scaffold_25384_1

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 2..805

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:KJL24578.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL24578.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 260.0
  • Bit_score: 409
  • Evalue 3.40e-111
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TFB0_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 260.0
  • Bit_score: 405
  • Evalue 2.70e-110
branched-chain amino acid ABC transporter similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 273.0
  • Bit_score: 312
  • Evalue 1.10e-82

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
CTGGCGGCGGTGGACGGCGTCTCGTTCACCGTCGGCCCGCACGAGGTCGTCTCGATCATCGGCCCCAACGGGTCGGGCAAGACGACGACCCTCAACCTGGTGACGGGGGCGATCCCCGCCCACGGCGGCTCGATCGTCCTCGACGGCACGCGGATCGACGTTGCGGACCCGGCGCGGATCGCCGAGCACGGCATCGCGCGCACGTTCCAGAACGGGCGCGTGTTCGCCGCCCTGTCCGTCGCGGACAACGTCGAGGTGGGGCTCCACACCACGCTGCGCGCGCACCGGCCCTTCCATCGGCTGTCGCACCTGGTCGGGCTGCGCTGGGTCGCCCTGCTGGGCGAGCTGGTCGTCGCGGTCGTCGGCACGCCGGCCGCCCGGCGCGAGCGGCGGGCGATCGACGCCACGGTGGCGGCGGAGATCGAGCGGTTCGAGGCGCGGCTCGGCCCGCGGCGCGACGACCCGGCGTACTCGCTCAGCTACGCCAACCGCCGCCGCACCGAGATCGCCCGCGCCCTGGCGCCGCGCCCGAAGCTGCTGGTGCTCGACGAGCCGACGGCCGGCATGAACCCGTCCGAGACGGCCGAGGTGCTGGGCCAGCTGCTCGAGCTCAAGGCCGAGGGGCAGGCGATGCTCCTCGTCGAGCACAAGCTCGACCTCGTCATGACCGTGTCCGACCGGGTGATCGTCATGGACGGCGGCCGGATCGTCGCGCAGGGGGCGCCGGACGAGGTGCGGGCCGACCCCGCGGTGATCGAGGCCTACCTCGGCCGCCGCCGCGTCGCCGCGGAGGAGCGAGCATGA
PROTEIN sequence
Length: 268
LAAVDGVSFTVGPHEVVSIIGPNGSGKTTTLNLVTGAIPAHGGSIVLDGTRIDVADPARIAEHGIARTFQNGRVFAALSVADNVEVGLHTTLRAHRPFHRLSHLVGLRWVALLGELVVAVVGTPAARRERRAIDATVAAEIERFEARLGPRRDDPAYSLSYANRRRTEIARALAPRPKLLVLDEPTAGMNPSETAEVLGQLLELKAEGQAMLLVEHKLDLVMTVSDRVIVMDGGRIVAQGAPDEVRADPAVIEAYLGRRRVAAEERA*