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SCN18_25_1_16_R2_B_scaffold_25433_3

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(708..1163)

Top 3 Functional Annotations

Value Algorithm Source
epimerase n=1 Tax=Rhodococcus opacus RepID=UPI00029CD047 similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 129.0
  • Bit_score: 88
  • Evalue 4.10e-15
Short-chain dehydrogenase/reductase family 42E member 1 similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 129.0
  • Bit_score: 88
  • Evalue 1.20e-15
Short-chain dehydrogenase/reductase family 42E member 1 {ECO:0000313|EMBL:AHK28331.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 129.0
  • Bit_score: 88
  • Evalue 5.70e-15

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 456
AACCTCGTGCATGGGATCGGGGACCGCTGGTTCCTAGCACCGCTGCTGGCCGTCATGCGCCGCCATGAGGCTTGGATCGGAAGTGGTGACACGCTGCTGTCGGCAATCGGACGTATCGAGCTCGGCAAGGTGCTCGCGGCGCTGGCGTGCTCCTCGGCGCCTGCCGGGGTGTACCACGCGGCGGCGTCGAAACCGGCACGACTGCGCGAGCTCGTTGAGCCGATCTACGCGCACGCTGGTCTTGTACCGCCTACTCGACGCCTCACTCCTGAGGATGCGATCACTCAGTTGGCGTTGCAGGGCGTCGCCAAACGACAAGTCACGAAGGTCGCGACCGACAACTGGTTCGACACGACGAAGCTGTGGACCGCCCTCGCCACAAACCTCGTCTCCAGCACTGAAGCCAGCTTCGACAGCGACGCGATTGAGTGGTACGCAACGGCACTGAGTCCCTAG
PROTEIN sequence
Length: 152
NLVHGIGDRWFLAPLLAVMRRHEAWIGSGDTLLSAIGRIELGKVLAALACSSAPAGVYHAAASKPARLRELVEPIYAHAGLVPPTRRLTPEDAITQLALQGVAKRQVTKVATDNWFDTTKLWTALATNLVSSTEASFDSDAIEWYATALSP*