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SCN18_25_1_16_R2_B_scaffold_1364_5

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(3586..3951)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, sigma subunit (Sigma70/sigma32) n=2 Tax=Microbacterium RepID=H8E3L4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 117.0
  • Bit_score: 186
  • Evalue 1.50e-44
von Willebrand factor A {ECO:0000313|EMBL:KIC59116.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 117.0
  • Bit_score: 187
  • Evalue 9.50e-45
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 99.0
  • Bit_score: 164
  • Evalue 1.70e-38

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 366
GTGGGCACAATCTACTACGGCGGTTCGGCGACCCCCATCCACATCGAGGATCGGGCGCTCGCGCATCTCAAGGTGGTCCTCGCCACGAAGCTGCGGCGCGGTGAGAGCTTCACCGTGTCGTGGCAGCATCCCGAGGACGAGCCACGCGGCCGGAGCACGATCTGGCTGCACCCGTCGATCCCGCTGCGATTCGTGTTCGACGATCCCGAGCCCGCCGTCCTGAGTCGGCAGTGGATCGAGGAGCTCGCGAACTCCGCCAACTCGTCAGGCGGCATCATGCTCGTCGCGGAGAACATCGACACCGGGCCGGTGCCGGTCGCCGACGACGCCCCGCAGACCGTCGCCGTCGTCACCCACGAGGACTGA
PROTEIN sequence
Length: 122
VGTIYYGGSATPIHIEDRALAHLKVVLATKLRRGESFTVSWQHPEDEPRGRSTIWLHPSIPLRFVFDDPEPAVLSRQWIEELANSANSSGGIMLVAENIDTGPVPVADDAPQTVAVVTHED*