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SCN18_25_1_16_R2_B_scaffold_2366_1

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 49..2322

Top 3 Functional Annotations

Value Algorithm Source
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 738.0
  • Bit_score: 1071
  • Evalue 0.0
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 738.0
  • Bit_score: 1071
  • Evalue 0.0
DNA ligase n=1 Tax=Glaciibacter superstes RepID=UPI0003B57DBA similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 741.0
  • Bit_score: 1094
  • Evalue 0.0

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2274
GTGGCCGACGGATCCGACATTCCCGAACTCACCCTCGATGCGGCGCGTGACGAGGTGCAGTCTCTGATCGACCGCATCATCGGCGCCCGGGACGCCTACTACGGGCGCGACACCGTGGTCGTGGACGACCAGACGTACGACGGCTGGATGCACCGGCTGGAGGCGCTCGAGCGCCTCTATCCCGAGCTGCAGAGTCAGGACTCCCCGAGACTCACGGTTGGTGCGGCATCGGGCACGCTGTTCGATCCCGTCGAGCATGCGGAGCGCATGCTGAGTCTCGACAACGTCTTCAGCGACGAGGAGTTCCTCGCATGGGCGGCGAAGGTCGAGCGCGACGCCGGGCGTCCGGTGCACTACCTGTGCGAGCTCAAGATCGACGGTCTCGCGCTGTCGCTGCGGTACGAGCACGGCCGGCTCACGTCAGCCGCCACGCGTGGTGACGGACGGGTCGGCGAGGATGTGACCGAGAACGTCCGCCGCATCCCCGGCATCCCACAGCGCCTCCGCGGCACCGGCCATCCGCCGCTCGTCGAGGTGCGCGGCGAGGTCTTCTTCGATGTCGCCGACTTCGAGGCGCTGAACGCGTATCAGGCCTCGGTGGGCGACCGTCTCTTCGCGAACCCTCGGAACGCCGCCAGCGGCTCGCTGCGCCAGAAGGCGGAGGGCAAGAACGAGCGCCAGCTCGAGGCGATGCGCCAGCGGGTGAGCAGGCTGCGCCTCACCGTTCACGGCATCGGTGCCTGGCCGGATCCTCCCGTATCGACGCAGAGCGAGGTGTACGGTCTCCTGGCGTCGTGGGGGCTGCCGACGAGCCGCTATTTCGAAGTGACCGACAGCGCCGTGGGCGCAGACGCCTACATCCGGCGATACGGCGAGAACCGCCACTCGATCGAGCACGAGATCGACGGCGTGGTCGTGAAAGTCGACGAGCTCGCGCTCCACGACGAGCTGGGGGCGACGAGTCGTGCTCCCCGCTGGGCCATCGCCTACAAATACCCGCCAGAGGAGGTCAACACGAAGCTCCTCGACATCGTGGTCTCGGTCGGGCGCACCGGTCGCGCGACGCCGTTCGCCGTCATGGAGCCCGCGCGTGTGGCGGGCAGCGTGGTGAGACAGGCGACGCTCCACAACCAGGACGTCGTGAAGGCGAAGGGCGTCCTGATCGGTGACACGATCGTGCTGCGCAAGGCGGGCGATGTCATTCCGGAGGTCCTCGGGCCTGTGGTCGAGCTGCGCGACGGCACCGAACGCGAGTTCGTCATGCCCACACGCTGCCCCGAGTGCGGCTTCCCTCTCGCACCGGCGAAGGAGGGGGACATCGATCTGCGCTGTCCGAATTCGCGTTCGTGCCCCGCTCAGGTGCGCGGTCGGGTGGAGCACATCGGCTCGCGCGGGGCACTCGACATCGAGGGACTCGGCGAGGTCTCGGCCGCGGCACTCACTCAACCGGTCCGGCCCGAGCGACCCCCGCTCGACACCGAGGCGGGACTGTTCGATCTCCGTCCCGAGGATCTGTTCGGGATCGATGTCGTCGTGCGGGATTCCGAGACCGGGTTGCCGAGGCTCGACGACGACGGCATCCCCGACACGCGATCGCCCTTCCGACGCCAGCGCAAGAAAAGCGATCCACCATACGACGGAGACGGTCCGTTCGACGGCGACGAGGCGGCCGTGCTGTCGAAGTCAGCGGTCGAGCTGCTGGCGAACATCGATGCCGCGAAGACGAGGGACCTCTGGCGCTTCCTGGTCGCACTGAACATCCGACACGTCGGGCCCGTCGCAGCAAGGGCCCTGGCGCAGTGGTTCGGGTCCGTGGATGCCATCCGCGCGGCGTCGCGAGATGAACTCGCTGACGTCGAAGGGGTCGGCGGCATCATCGCGGACGCCGTGATCGACTGGTTCGAGGTCGATTGGCATCGGGAGATCGTCGATCGATGGGGGGCCGCGGGTGCGCGGCTCACGACCCCGGGTCATCCGGGGCCGGGCGCCGCGACGGCGTCAGGCGGCGTCCTCGACGGCCTCACCGTCGTTGCGACCGGTTCGCTCGACGGCTACTCGCGCGAGGGGGCGCAGCAGGCCATCATCGACGCGGGCGGCAAGGCGGCTTCGAGTGTGTCGAAGAAGACCGACTTCGTCGCGGCAGGTCCGGGCGCGGGTTCCAAGCTGGCGAAAGCGGAGGAGCTGGGCGTCCGCATCATCGACGCCTCGCAGTTCCGCGTCCTGGTCGAGCAAGGGCCGGCTGCGCTCGATGCGGCGCGGTCCGACGCAGGCTGA
PROTEIN sequence
Length: 758
VADGSDIPELTLDAARDEVQSLIDRIIGARDAYYGRDTVVVDDQTYDGWMHRLEALERLYPELQSQDSPRLTVGAASGTLFDPVEHAERMLSLDNVFSDEEFLAWAAKVERDAGRPVHYLCELKIDGLALSLRYEHGRLTSAATRGDGRVGEDVTENVRRIPGIPQRLRGTGHPPLVEVRGEVFFDVADFEALNAYQASVGDRLFANPRNAASGSLRQKAEGKNERQLEAMRQRVSRLRLTVHGIGAWPDPPVSTQSEVYGLLASWGLPTSRYFEVTDSAVGADAYIRRYGENRHSIEHEIDGVVVKVDELALHDELGATSRAPRWAIAYKYPPEEVNTKLLDIVVSVGRTGRATPFAVMEPARVAGSVVRQATLHNQDVVKAKGVLIGDTIVLRKAGDVIPEVLGPVVELRDGTEREFVMPTRCPECGFPLAPAKEGDIDLRCPNSRSCPAQVRGRVEHIGSRGALDIEGLGEVSAAALTQPVRPERPPLDTEAGLFDLRPEDLFGIDVVVRDSETGLPRLDDDGIPDTRSPFRRQRKKSDPPYDGDGPFDGDEAAVLSKSAVELLANIDAAKTRDLWRFLVALNIRHVGPVAARALAQWFGSVDAIRAASRDELADVEGVGGIIADAVIDWFEVDWHREIVDRWGAAGARLTTPGHPGPGAATASGGVLDGLTVVATGSLDGYSREGAQQAIIDAGGKAASSVSKKTDFVAAGPGAGSKLAKAEELGVRIIDASQFRVLVEQGPAALDAARSDAG*