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SCN18_25_1_16_R2_B_scaffold_2203_5

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(4494..6149)

Top 3 Functional Annotations

Value Algorithm Source
helicase n=1 Tax=Microbacterium yannicii RepID=UPI000376B523 similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 555.0
  • Bit_score: 1005
  • Evalue 2.10e-290
ATP-dependent DNA helicase {ECO:0000313|EMBL:GAD35275.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 551.0
  • Bit_score: 975
  • Evalue 1.90e-281
xpbC; DNA or RNA helicase of superfamily II similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 551.0
  • Bit_score: 957
  • Evalue 1.10e-276

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
ATGGCTGACGGACCCCTCATCGTGCAGAGCGACCGGACGGTGCTGCTCGAAGTGGCCCATCCGGACGCGGAGAGCGCCCGGCACGAGCTCGCGATCTTCGCCGAACTGGAGCGGGCGCCCGAGCACATCCACACCTACCGGATCACCCGACTCGGCCTGTGGAACGCCCGCGCGGCCGGTCACGATGCGTCCGACATGCTCGCCACGCTCGACCGCTGGTCGCGGTTCCCCGTGCCGCCGTCGGTGTCCATCGACATCCGCGAGACGGTCGGCCGGTACGGGCGGCTGGTCATCGAGCGCGCCGACATCGAGGGTCACGGCGAAGGCGTCCTGGTCCTCCGGTCGACGGATGCCGCGGTGCTCGCCGAGATCACGCGGAACAAGCGCATCCAGCCGCTGCTCATCGCCCACCCCTCCCCCGACGTGTACGTCGTGGACGCGTGGGCCCGCGGACACATCAAGCAGGAGCTCCTCAAGATCGGCTGGCCGGCGGAGGATCTCGCCGGCTACACACCGGGCACGCCGCATCCCATCGACCTCGACGAGGAAGGGTGGCACCTCCGGCCGTACCAGCGGCAGGCTGTCGACATCTTCACCGACGGCGGCTCGGGCGTGGTCGTGCTCCCCTGCGGTGCCGGCAAGACGCTCGTCGGTGCGGGGGCGATGGCCGCGACCAAGACGACGACCCTGATCCTGGTGACCAACACCGTGAGCGCGCGGCAGTGGCGCGACGAGCTGCTCAAGCGCACGAGCCTCACCGCCGAGGAGATCGGCGAGTACTCCGGGCAGGTCAAGGAGATCAAGCCCGTGACCATCGCGACCTACCAGATCCTCACGGCGAAGCGGAAGGGCGCGTACGCCCACCTGGCGCTCCTCGACGCCCTGGACTGGGGTCTCATCGTGTACGACGAGGTGCACCTGCTCCCCGCACCCGTGTTCAAGCTCACCGCCGACCTCCAGGCCCGGCGGCGGCTCGGCCTCACGGCCACGCTGGTGCGCGAGGACGGCCGCGAGGGCGACGTCTTCAGCCTCATCGGCCCCAAGCGCTTCGACGCGCCCTGGAAGGAGATCGAGGCCCAGGGATTCATCTCCCCGGCCGTCTGCTACGAGGTGCGCGTCGACCTGCCCGCCGGAGACCGGCTGGAGTATGCGGCGTCCGCCGACGACGAGCGCTACCGCCTCGCCGCGACCGCGCCGGCGAAGATCGGGGTCGTGCGGAGCCTGGTCGAGCGCCACCGCGGCGAGCGCATCCTCGTCATCGGCCAGTACCTCGATCAGATCGACGTGCTCGCCGACGCGCTCGGCGCCCCCAAGATCACCGGCGCCACCCCGGTCGACGAGCGCGAGGAGCTGTACCAGGCGTTCCGCGAGGGCACGATCGAACTGCTCGTGGTGTCGAAGGTCGCGAACTTCTCGATCGACCTGCCCGAGGCATCCGTCGCCATCCAGGTGTCGGGATCGTTCGGCTCCCGGCAGGAGGAGGCGCAGCGACTCGGCCGGCTGCTGCGACCCAAGGAGTCCGGGCACACGGCGAGCTTCTACACGCTCATCGCGCGCGACACCGTGGATCAGGACTTCGCCCAGAACCGGCAGCGCTTCCTGGCCGAGCAGGGCTACGCGTATACGATCCTCGACGCCGACCAGATCGCCGCGTGA
PROTEIN sequence
Length: 552
MADGPLIVQSDRTVLLEVAHPDAESARHELAIFAELERAPEHIHTYRITRLGLWNARAAGHDASDMLATLDRWSRFPVPPSVSIDIRETVGRYGRLVIERADIEGHGEGVLVLRSTDAAVLAEITRNKRIQPLLIAHPSPDVYVVDAWARGHIKQELLKIGWPAEDLAGYTPGTPHPIDLDEEGWHLRPYQRQAVDIFTDGGSGVVVLPCGAGKTLVGAGAMAATKTTTLILVTNTVSARQWRDELLKRTSLTAEEIGEYSGQVKEIKPVTIATYQILTAKRKGAYAHLALLDALDWGLIVYDEVHLLPAPVFKLTADLQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGFISPAVCYEVRVDLPAGDRLEYAASADDERYRLAATAPAKIGVVRSLVERHRGERILVIGQYLDQIDVLADALGAPKITGATPVDEREELYQAFREGTIELLVVSKVANFSIDLPEASVAIQVSGSFGSRQEEAQRLGRLLRPKESGHTASFYTLIARDTVDQDFAQNRQRFLAEQGYAYTILDADQIAA*