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SCN18_25_1_16_R2_B_scaffold_3731_4

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(4792..5211)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with putative antiterminator output domain n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFP4_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 139.0
  • Bit_score: 258
  • Evalue 3.60e-66
Putative transcriptional regulatory protein pdtaR {ECO:0000313|EMBL:KJL35778.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 139.0
  • Bit_score: 259
  • Evalue 1.70e-66
response regulator with antiterminator output domain similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 139.0
  • Bit_score: 258
  • Evalue 1.00e-66

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Taxonomy

Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GTCAAGATGCCGCAGCTCGACGGCATCTCGGCCGCCGAGAAGCTGAGCAAGAATCACATCGCGCCCGTCGTGCTGCTCACCGCGTTCAGCCAGAAGGAGCTCGTGGAGCGCGCCAGCGAGGCGGGTGCGCTGGCGTACGTCGTGAAGCCCTTCACCCCGAACGACCTTCTTCCCGCGATCGAGATCGCCCTCGCGCGCCACGAGCAGATCATCACGCTCGAGGCCGAGGTCGCCGACATGGTCGAGCGGTTCGAGACGCGCAAGCTCGTCGACCGCGCCAAGGGGCTGCTGAACGAGAAGATGGGTCTCACCGAGCCCGAGGCGTTCCGCTGGATCCAGAAGGCCTCGATGGACCGCCGCCTCACGATGAAGGACGTCGCGCAGGCCATCATCGAGCAGCTGGCGCCCAAGAAGTCCTGA
PROTEIN sequence
Length: 140
VKMPQLDGISAAEKLSKNHIAPVVLLTAFSQKELVERASEAGALAYVVKPFTPNDLLPAIEIALARHEQIITLEAEVADMVERFETRKLVDRAKGLLNEKMGLTEPEAFRWIQKASMDRRLTMKDVAQAIIEQLAPKKS*