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SCN18_25_1_16_R2_B_scaffold_3878_6

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(4055..4873)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 278.0
  • Bit_score: 415
  • Evalue 4.80e-113
RNA pseudouridine synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372E91E similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 262.0
  • Bit_score: 424
  • Evalue 5.70e-116
rsuA; 16S rRNA uridine-516 pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 243.0
  • Bit_score: 395
  • Evalue 8.00e-108

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Taxonomy

Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGAGCGAGGAGTCCGCGGAGGGCGTGCGCCTGCAGAAGGCCCTCGCCAACGCCGGTGTCGCGTCACGCCGCGTGGTCGAGGACATGATCGTCGCGGGCAGGATCCGCGTGAACGGCACGGTGGTCAGCGAGCTCGGCTCGCGCATCCATCCCGATCGGGACCTCGTGGACGTCGACGGCACCGCCGTGCAGCTCGACCAGAGCCGCCGCTACGTGATGCTCAACAAACCCACCGGTGTGGTCAGCTCGATGCGCGACGAACGCGGACGCGCCGACCTCCGGCAGTTCACACGGGAGTGGCCCGAGCGGCTCTACAACGTCGGGCGCCTGGATGCCGAGACGAGCGGCCTGCTCGTCCTCACGAACGACGGCGAGCTCGCGCACGTGCTGGCGCACCCGTCGTTCGGGGTCACCAAGGTGTACGTCGCGAAGGTCGACGGCCGGGTCACGCCGCAGACGATCGGACGCCTCACGCGCGGCGTCGAGCTCGACGACGGTCCGATCGCGGCGGACAAGGCGCGCCTGCTCGACGTGTCGGGCGGGACGAGCCTGGTCGAGCTCACCCTGCACTCGGGGCGCAACCGGATCGTGCGACGGATGATGGCCGCGGTCGGGCATCCCGTCGTGGAGCTGGTCCGCCGCCAGTTCGGCCCGCTCCACCTGGGAACGCTCCCTGCGGGGCGTGCACGCGAGTTGACTAAGGTGGAACGCGGCGCACTTCTCACCTTGGCCCGTCGTGACAACGATGCGCCCGAGGCATCCGCGCGCCGCGAGGCGGACGACTCGACACCGCCGGGGGCCGATCAGGAGAACCAGTGA
PROTEIN sequence
Length: 273
MSEESAEGVRLQKALANAGVASRRVVEDMIVAGRIRVNGTVVSELGSRIHPDRDLVDVDGTAVQLDQSRRYVMLNKPTGVVSSMRDERGRADLRQFTREWPERLYNVGRLDAETSGLLVLTNDGELAHVLAHPSFGVTKVYVAKVDGRVTPQTIGRLTRGVELDDGPIAADKARLLDVSGGTSLVELTLHSGRNRIVRRMMAAVGHPVVELVRRQFGPLHLGTLPAGRARELTKVERGALLTLARRDNDAPEASARREADDSTPPGADQENQ*