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SCN18_25_1_16_R2_B_scaffold_2901_5

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 3592..4275

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003764A97 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 227.0
  • Bit_score: 401
  • Evalue 5.60e-109
Sensory transduction protein regX3 {ECO:0000313|EMBL:KJL23547.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 227.0
  • Bit_score: 399
  • Evalue 1.80e-108
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 227.0
  • Bit_score: 394
  • Evalue 1.50e-107

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGACCCGCGTCCTGATCGTCGAGGACGAGCCCGACCTCGCGGACCCGCTCGCCTACCTTCTGCGTCGGGAGGGGTTCGACGTCGACGTGGCCGAGGACGGTCCCGCCGCCCTCGCCTCGTTCCAGGAGCACGGAGCCGACATCATCCTGCTCGACCTCATGCTCCCCGGGATGCCGGGGACCGAGGTGTGCCGCCAGATCCGGACCAGCTCGAGCGTGCCCATCATCATGGTCACGGCCAAGGACTCGGAGGTCGACATCGTCGTGGGACTGGAGCTCGGCGCGGACGACTACGTCACCAAGCCGTACTCGGCCCGGGAGCTGCTGGCCCGCATGCGCGCCGTCCTCCGTCGCACCGCCCATGCCGAGGCGGACCTGGACGACCGCATCCTCACCGGTGGCCGGGTCACGCTCGACATCGACCGACACACCGTGTCCGTCGACGGCCGCGAGATCAACATGCCGCTGAAGGAATTCGAGCTGCTCGAGGTGCTGATGAGGAACGCCGGTCGCGTCCTGACCCGCGGTCAGCTCATCGACCGGGTGTGGGGGACGGACTACTTCGGCGACACGAAGACGCTCGACGTGCACATCAAGCGCATCCGTTCGCGCATCGAGGAGAACCCGGGCGAACCCGTGCTCCTGGTCACCGTGCGCGGCCTGGGCTACCGCTTCGAGGGCTGA
PROTEIN sequence
Length: 228
MTRVLIVEDEPDLADPLAYLLRREGFDVDVAEDGPAALASFQEHGADIILLDLMLPGMPGTEVCRQIRTSSSVPIIMVTAKDSEVDIVVGLELGADDYVTKPYSARELLARMRAVLRRTAHAEADLDDRILTGGRVTLDIDRHTVSVDGREINMPLKEFELLEVLMRNAGRVLTRGQLIDRVWGTDYFGDTKTLDVHIKRIRSRIEENPGEPVLLVTVRGLGYRFEG*