ggKbase home page

SCN18_25_1_16_R2_B_scaffold_4654_3

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 2054..2800

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 244.0
  • Bit_score: 445
  • Evalue 4.00e-122
ribonuclease PH n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F4C2E similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 242.0
  • Bit_score: 443
  • Evalue 1.10e-121
rph; RNase PH similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 241.0
  • Bit_score: 423
  • Evalue 2.50e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGACCGACATCACCCGTGCGGACGGCCGTGCCGTCGATCAGCTGCGACCCATCACCATCGAACGCGGCTGGAGCACTCAGGCCGAGGGCTCGGCGCTGATCAGCTTCGGCAACACGAAGGTGCTGTGCACGGCGTCGTTCACGAACGGCGTGCCGCGCTGGCTCACGGGGAAGGGCAAGGGCTGGGTGACCGCCGAGTACGCCATGCTGCCGCGGGCGACGAACGACCGCAACGACCGCGAATCGGTGAAGGGACGCATCGGCGGCCGCACCCACGAGATCTCCCGGCTGATCGGCCGCGCGCTGCGCGCCGTCGTCGACACGAAGGCCCTCGGCGAGAACACGATCGTGATCGACTGCGATGTGCTGCAGGCCGACGGCGGGACCCGCACGGCCGCCATCACCGGCGCATATGTCGCCCTCGCTGACGCCATCGAGTGGGGCCGCGGCAAGAAGTTCATCGGGCAGAAGGCGAAGGTCCTCTTCGACTCGGTCGCCGCGGTGTCGGTCGGCATCATCGACGGTGAGCCCATGCTCGACCTCGCGTACGTCGAGGACGTACGCGCCGAGACCGACATGAACGTCGTGGTCACGGGTCGTGGCCTGTTCGTCGAGGTGCAGGGGACCGCCGAGGGCGCGCCGTTCGACAAGTCGGAGCTCGACGCCCTGCTCGCGCTCGGCGTGGCCGGATGCGGGCAGCTGCGCGATCTCCAGTCCGCGGCCCTCGAGGGCACGACCGGTGCCTGA
PROTEIN sequence
Length: 249
MTDITRADGRAVDQLRPITIERGWSTQAEGSALISFGNTKVLCTASFTNGVPRWLTGKGKGWVTAEYAMLPRATNDRNDRESVKGRIGGRTHEISRLIGRALRAVVDTKALGENTIVIDCDVLQADGGTRTAAITGAYVALADAIEWGRGKKFIGQKAKVLFDSVAAVSVGIIDGEPMLDLAYVEDVRAETDMNVVVTGRGLFVEVQGTAEGAPFDKSELDALLALGVAGCGQLRDLQSAALEGTTGA*