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SCN18_25_1_16_R2_B_scaffold_3639_5

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(3709..5295)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037AC5CB similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 528.0
  • Bit_score: 798
  • Evalue 3.70e-228
Type 4 fimbrial assembly protein PilB {ECO:0000313|EMBL:CDK01030.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 528.0
  • Bit_score: 793
  • Evalue 1.30e-226
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 526.0
  • Bit_score: 615
  • Evalue 1.20e-173

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Taxonomy

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1587
GACGGCCCCGAGCTCCCCCAGCACCTCGTGGCGTCGCACATCCTCACGGAACGACAGGTCGCCGAGGCCGTGTCGATGCACACCGGAGCGCCCTTCGTGGATCTCGCGAATGCGATCCTCGATCCCGATGTCATCGCGATGGTGCCCAGCGCCCTGTGTCGCCGCTACCAGCTCCTGCCGATCGAACGATCCCGTCGCGGACTCGGGGTGGCGATGCTCGATCCGACGGACATCATCGCCATCGACGACGTCTCCAGCGTCACGGACCTGCAGGTCCGTCCGCTCGTCGTGGCCGCCGACGCGCTCCGCCAGGCGTTCGACCGCTACCTGCGCTCGGACGAGGAGCTCAGCGATCTCTCGGAGCAGCTCGGCGAGGCCGCCAGCGGTGACATGGTGTCGTTCACCGAATCGCTGGACGACCAGGACGCCGACGCGCCCATCATCCGCTTCGTCAACCTCCTCATCACCCAGGCGATCAACGACCGCGCGAGCGACATCCACATCGAACCGGGCGAGCGTCAGCTGACGGTGCGGTTCCGCATCGACGGCGTGCTCCACGAGATGCAGCGGGCCGACCGCGGCATCCAGGACGGGGTCATCTCGCGGCTCAAGATCATGTCGGCCATCGACATCGCGGAGCGACGGCGGCCCCAGGACGGCCGCATCTCGGTCACCCACGAGGGCCGCCAGATCGATCTGCGCGTCGCAACATTGCCGACGGTGTGGGGCGAGAAGATCGTCATGCGCATCCTCGACAACTCCGGCCAGGCGATGTCGATGGGCGATCTGCGGTTCTCGACCGTCAACGAGCAGCGCTTCCGCGAGTCGATCACCCGCCCGCACGGCATGGTGCTCGTGACGGGTCCGACCGGCTCCGGCAAGTCCACGACGCTGTACACCGCGCTGCGCACGGTCGCCAATCCCGCGATCAACGTCATCACGGTCGAGGATCCGGTCGAGTATCGCATCGCCGGCATCAACCAGGTGCAGGTGAATCAGCGCGCGGGCATGACCTTCCAGGCCGCGCTGCGCTCCATTCTGCGCAGCGATCCGGACGTGGTGCTCGTCGGCGAGATCCGGGATCAGGAGACGGCGACGATCTCCATCGAGGCGTCGCTCACCGGCCACCTGGTGCTCTCGACGCTGCACACGAACGACGCTCCGAGCGCCCTCACGCGACTGACCGAGCTCGGCTGCGAGCCGTTCCTCGTCGGCACGGCGCTGACCGCGGTCGTCGCCCAGCGCCTCGCCCGCCGGCTCTGCCAGAACTGCCGCGTCCCGTTCACGGAGCCGACCGAGGTGCTGACGTCGCTGCGCTTCCCGCACGATCCGCAGGACGTGCCGCAGCTGTACAAGGCGAATGGGTGCCCGGCCTGCTCCGGGACCGGATACCGCGGCCGCGTCGCGCTGCACGAGGTCATGACGGTGACCGAGGAGATGGAGCAGCTCGTCGTCACGCACGCGACGGGCACGGACATGCGCCAGCTCGCGCTGCAGCAGGGGATGGTCGGCCTGCGGGAGGACGGCTGGAGCAAGGTCGCTCTGGGGCTGACCACGATCGAAGAGGTCCTGCGCGTCTCGGTGTGA
PROTEIN sequence
Length: 529
DGPELPQHLVASHILTERQVAEAVSMHTGAPFVDLANAILDPDVIAMVPSALCRRYQLLPIERSRRGLGVAMLDPTDIIAIDDVSSVTDLQVRPLVVAADALRQAFDRYLRSDEELSDLSEQLGEAASGDMVSFTESLDDQDADAPIIRFVNLLITQAINDRASDIHIEPGERQLTVRFRIDGVLHEMQRADRGIQDGVISRLKIMSAIDIAERRRPQDGRISVTHEGRQIDLRVATLPTVWGEKIVMRILDNSGQAMSMGDLRFSTVNEQRFRESITRPHGMVLVTGPTGSGKSTTLYTALRTVANPAINVITVEDPVEYRIAGINQVQVNQRAGMTFQAALRSILRSDPDVVLVGEIRDQETATISIEASLTGHLVLSTLHTNDAPSALTRLTELGCEPFLVGTALTAVVAQRLARRLCQNCRVPFTEPTEVLTSLRFPHDPQDVPQLYKANGCPACSGTGYRGRVALHEVMTVTEEMEQLVVTHATGTDMRQLALQQGMVGLREDGWSKVALGLTTIEEVLRVSV*