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SCN18_25_1_16_R2_B_scaffold_2843_4

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(2374..3036)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B69623 similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 220.0
  • Bit_score: 328
  • Evalue 2.60e-87
Response regulator protein VraR {ECO:0000313|EMBL:KJL32120.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 220.0
  • Bit_score: 328
  • Evalue 6.30e-87
two component system response regulator similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 219.0
  • Bit_score: 270
  • Evalue 3.10e-70

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
GTGATCCGCGTCGCGACCGCGGACGACCACCTCCTGGTGCGCGCGGGGTTCCGGGCTCTCCTCGACTCCGAGCCCGACATCGAGGTGCGGGTGGAGGCGTCCGGCGGCGAGGAGCTGCTGCGCCGCATCCGGCAGACCCCCGTCGATGTGGCTCTTCTCGACATCCGGATGCCCGACGGGGACGGCCTCTGGACCACCGAGCAGATCGCGGCGGACGACGCGCTCGCCGCGGTGAAAGTCGTCATCGTGACCACCTTCGAGCTGGATGAGTACGTCGCCCGCGCGATCATGGCGGGGGCCAGCGGCTTCCTCGTCAAGGACACCGAGCCCGTCGACCTCATCCGCGCGGTCCGCGTCGTCGCCGCCGGCGACGCCCTCCTTTCGCCGAGTGTCACGCGCAGACTCCTCGAACGCGCCGCGACGGGGCTGCGTGAGACGTCCGTCCCGTCGGAGCTCGCAGAGCTGACCGACCGCGAGACGGAGGTGCTCCGGCTCGTCGCCCACGGCCTCACGAACGACGAGATCGCTCAGCGACTGTTCCTCTCGCCCCTGACCGCCAAGACGCACGTGTCGCGGATCATGCAGAAGCTCCATGCGAGGGACAGGGCGCAGCTCGTCGTGATCGGATACGAATCCGGCCTCGTCGCGCCGGGTTGGCAGTAG
PROTEIN sequence
Length: 221
VIRVATADDHLLVRAGFRALLDSEPDIEVRVEASGGEELLRRIRQTPVDVALLDIRMPDGDGLWTTEQIAADDALAAVKVVIVTTFELDEYVARAIMAGASGFLVKDTEPVDLIRAVRVVAAGDALLSPSVTRRLLERAATGLRETSVPSELAELTDRETEVLRLVAHGLTNDEIAQRLFLSPLTAKTHVSRIMQKLHARDRAQLVVIGYESGLVAPGWQ*