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SCN18_25_1_16_R2_B_scaffold_6826_4

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1847..2449)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 171.0
  • Bit_score: 213
  • Evalue 1.60e-52
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EB2331 similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 177.0
  • Bit_score: 231
  • Evalue 5.20e-58
shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 184.0
  • Bit_score: 211
  • Evalue 1.60e-52

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGACGTCTGCGACCGTGGACGCGACACCGCCCGGCGAGACGACCCGCGGGAGCGCTGTCGTGCTGATCGGCCCGATGGGTGCCGGCAAGACCAGCGTCGGACGCAAGCTCGCGCGAGTGCTGGGCACAACGTTCTTCGACACCGACATCGCCGTCGTGCGCGACCACGGCCCCATCGCCGACATCTTCGCGTCCGCGGGTGAGGCGCACTTCCGCGCCCTCGAGCGGGAGGCGGTCGTGGCAGGGCTGCGCCGCGGCGGGATCGTGGCGCTCGGCGGGGGCGCCATCCTGGACCCCCGCACGCGGGCGGACCTCCTCGCTCACCGCGTCGTCCTCCTCACGGTCGACCAGCGCACCGTCGCCGGACGGATCCATGACTCGACGCGACCGCTGCTGCAGGGGGATGACGCGATGAGCCGGTGGAACGCGGTGATGGACGCGCGGCGCGATCTCTACGAGCAGACCGCCGACGTCCGGTTCGACACGTCGTCCGGCCACATCCAGCACATCGTCGAGCGGATCGCGTCCTGGGTGCGCGACACCGAGGCGAGCGCGCTCGACGCCGCGGACGACGACCGCACGCACTCCGGAGGCGATGCATGA
PROTEIN sequence
Length: 201
MTSATVDATPPGETTRGSAVVLIGPMGAGKTSVGRKLARVLGTTFFDTDIAVVRDHGPIADIFASAGEAHFRALEREAVVAGLRRGGIVALGGGAILDPRTRADLLAHRVVLLTVDQRTVAGRIHDSTRPLLQGDDAMSRWNAVMDARRDLYEQTADVRFDTSSGHIQHIVERIASWVRDTEASALDAADDDRTHSGGDA*