ggKbase home page

SCN18_25_1_16_R2_B_scaffold_13737_2

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 348..971

Top 3 Functional Annotations

Value Algorithm Source
endopeptidase Clp (EC:3.4.21.92) similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 207.0
  • Bit_score: 309
  • Evalue 4.40e-82
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031D6C59 similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 202.0
  • Bit_score: 351
  • Evalue 4.60e-94
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|RuleBase:RU003567}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 202.0
  • Bit_score: 349
  • Evalue 2.50e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGCAGACGAAGGCAAGATCCCGGTGTTCGGAGGCGAGGCGCGCCGCGAGCTGTACCAGCAGCGCGTGCTCGTGCTCGACGGACCCCTCGACGACGACAACGGCACGCTCCTGGCTACGCAGCTCCTGGCACTGGCTGCGGAGGATGCCGCCGCCGACATCGCGCTCTGGATCAACTCGCCCGGCGGCTCGGTGCCGTCGATGCTCGCGATCCGCGACGTGATGCGGCTCATCCCGAACGATGTCTCGACCCTCGCCCTGGGACTGGCGTGCAGCGCGGGGCAGTTCCTGCTCTCGGCGGGGACACGCGGCAAGAGACGCGCCCTCCCGCACGCACGCATCCTGATGCATCAGGGATCGTCGGGCATCGGCGGGTCCGCGGTCGACGTCGAGGTTCAGGCCGGCGACCTGCGCCACATGCGCGACACCGTGCTCGGGCTCATCGCCGACGACACCGGCCAGAGCATCGACCGCGTCTTCGAGGACTCCCTCCACGACCACTGGTACACGGCCGCCGAGGCACGGGAATACGGGTTCATCGACGAGGTCGTCGCCGACTTCGCGCAGATCTCCCCGCGCCGCCGTCGGGCAGCGGGCCTCGGCGTGACGGAGGCGGCGGCGTGA
PROTEIN sequence
Length: 208
MADEGKIPVFGGEARRELYQQRVLVLDGPLDDDNGTLLATQLLALAAEDAAADIALWINSPGGSVPSMLAIRDVMRLIPNDVSTLALGLACSAGQFLLSAGTRGKRRALPHARILMHQGSSGIGGSAVDVEVQAGDLRHMRDTVLGLIADDTGQSIDRVFEDSLHDHWYTAAEAREYGFIDEVVADFAQISPRRRRAAGLGVTEAAA*