ggKbase home page

SCN18_25_1_16_R2_B_scaffold_2577_6

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial_73_8

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 14 / 38 MC: 1
Location: 3508..4488

Top 3 Functional Annotations

Value Algorithm Source
alpha integrin n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI00035F715D similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 285.0
  • Bit_score: 249
  • Evalue 3.00e-63
Uncharacterized protein {ECO:0000313|EMBL:KGM14816.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 305.0
  • Bit_score: 295
  • Evalue 8.70e-77
FG-GAP repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 317.0
  • Bit_score: 226
  • Evalue 1.00e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGGGCGTCAGGGGGCGGCGCGGCGTGACACGCGCCTCGGTGGGGCGTGCGGTGGCGATCGTCGCGGTCGCCGGCCTGCTGGTGCTCAGCGCCGCCCAGGGCGAGGGCGCGGTGCTGGCACCGACGTGGGGCACGTCCGCCGAGGCTGCCGCCACGGTCCCCGCCGGTCCCGTCAGCTGCCACGACGGCGCGATGCAGATCGTGGCGCACGAGGACGACGACCTGCTGTTCCTCAGCCCCGACCTGCTGCACGACATCCAGTCCGGTCGGTGCGTGCGCACCGTCGTCGTGACCGCGGGAGACGCCGCCCAGGGGGCGGCGTACTGGAAGTCGCGGGAGCGCGGCAGCCAGGCGGCGTACGCCCAGATGGCCGGCGTGCGGGACGCGTGGACGACGACGGACGCCGGCGTGCCGGGGCACCCGATCCCCCTGCTCACGCTCACCGCCGACCCGCGCGTCTCGATCGCCTTCCTGCGCCTGCCCGACGGCAACCGGCGCGGGACCGGCATGCGGGTGCACGACCACGAGAGCCTGATGCGCCTCTGGCAGGGCCTGATCCCGACGATCACGGCCGTCGACGGCTCGTCGACCTACACCGCTGACACGCTGACCTCCACGCTGACCGCACTGGTGAACACCTTCGCGCCGAGCACCGTCCGCACCCAGGACTGGACCATCCCCTTCCAGACCGGCGACAACGCCGACCACACCGCCACCGCGCTGTTCGTGCGGTCGGCCGACCATGCCGTCACCTCCGCGCACGCGCTGCTCTCCTACGGCGGCTACCCGATCTGGACCCGACCCACCGTGGTCCACGGCGCCGACCTGCGGGACAAGACCGCCGCGTTCGTCGCCTACGCGCACCACGACCCCCTCATGTGCCTCGAGCCGTGGTGCGCGGACTCCGTGGTGGCGGCTCTGCGGCTCAGCCGCCAGTACGTGGTGGCCTCGCAGACCACCGTCGGCCCTGGAGCCGGCTGA
PROTEIN sequence
Length: 327
MGVRGRRGVTRASVGRAVAIVAVAGLLVLSAAQGEGAVLAPTWGTSAEAAATVPAGPVSCHDGAMQIVAHEDDDLLFLSPDLLHDIQSGRCVRTVVVTAGDAAQGAAYWKSRERGSQAAYAQMAGVRDAWTTTDAGVPGHPIPLLTLTADPRVSIAFLRLPDGNRRGTGMRVHDHESLMRLWQGLIPTITAVDGSSTYTADTLTSTLTALVNTFAPSTVRTQDWTIPFQTGDNADHTATALFVRSADHAVTSAHALLSYGGYPIWTRPTVVHGADLRDKTAAFVAYAHHDPLMCLEPWCADSVVAALRLSRQYVVASQTTVGPGAG*