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SCN18_25_1_16_R2_B_scaffold_5155_1

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial_73_8

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 14 / 38 MC: 1
Location: comp(3..779)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGN7_CELFN similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 252.0
  • Bit_score: 333
  • Evalue 1.30e-88
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 252.0
  • Bit_score: 333
  • Evalue 3.50e-89
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADG75135.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 252.0
  • Bit_score: 333
  • Evalue 1.80e-88

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Taxonomy

SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 777
GTGACGCAGACCACAGCCGAAGCCGCCGCGTCGTCCGCCGCGCCGGACGACGTCGGCGCACCGGTCGTGCAGGACGGGTTCGACGCTCTCGTCGCGCCGCTGCGCCGCGAGCTGCTCGCCCACTGCTACCGGATGACCGGGTCGCTGCTGGATGCCGAGGACGCCCTGCAGGAGACCTGGCTGCGGGCGTGGCGCGCGCTGCCGGACTTCGAGGGCAGGTCCTCCCTGCGGACGTGGATGTACCGCATCGCGACGCGCGTCTGCCTGTCCCACCTGGAGGGCAGGGCGCGACGGCCGCTCCCGGTGGGTCTCGGTGGACCGCCGGCGGACCCCGCCGTCGAGCCGCACCCGGACCGCTCGGTGCCGTGGCTGGAACCCCTGCCCGACCGCCTGCTGTGGAGCACTCCGGACGCCGACCCGGCCGACCGGGCGGTGGACGTCGACACCGTGCGCCTGGCCTTCGTGGCGGCGCTGCAGCACCTCCCCGCGCAGCAGCGCGCCGTCCTGCTGCTGCGGGACGTGCTGGCCTGGACGGCGGCGGAGGTGGCCCAGGCGCTGCGGCTGTCCGTGGCGGCGGTCAACTCCACGCTCCAGCGGGCGCACTCCCGCATGGCCACGCTCGACGTCCCGCCGGCACCCGCGGAGCTCACGCCCCACCAGCAGCATCTGCTGCGCCGGTACGTGGCGGCCTTCGAGGCGTACGACGTGCCCGCTCTCGTCACGCTGCTCGCGGCGGACGTCGTCTGGGAGATGCCGCCGTACCCCGAGTGGTACCAG
PROTEIN sequence
Length: 259
VTQTTAEAAASSAAPDDVGAPVVQDGFDALVAPLRRELLAHCYRMTGSLLDAEDALQETWLRAWRALPDFEGRSSLRTWMYRIATRVCLSHLEGRARRPLPVGLGGPPADPAVEPHPDRSVPWLEPLPDRLLWSTPDADPADRAVDVDTVRLAFVAALQHLPAQQRAVLLLRDVLAWTAAEVAQALRLSVAAVNSTLQRAHSRMATLDVPPAPAELTPHQQHLLRRYVAAFEAYDVPALVTLLAADVVWEMPPYPEWYQ