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SCN18_25_1_16_R2_B_scaffold_5478_1

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial_73_8

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 14 / 38 MC: 1
Location: comp(2..601)

Top 3 Functional Annotations

Value Algorithm Source
NmrA family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B5746F similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 192.0
  • Bit_score: 287
  • Evalue 6.10e-75
Uncharacterized protein {ECO:0000313|EMBL:EOD62934.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 196.0
  • Bit_score: 256
  • Evalue 2.10e-65
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 201.0
  • Bit_score: 154
  • Evalue 1.70e-35

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
TTGGGCACTGACGCCGACGACGACGCGGTCCGCCGGCACGGCACGGAGCACGTCGTCGGGATCTCCAGCGCCGGCCACGGCTGGACGGAACCGGCGGGAGTGCTGTCCGCCGCCTTCGCGATGGACGACGAGCTCGCGGGATCCGGCGCCGCCTACCGGGCGCTGTCCATGCCGTTCTACATGGAGAACCTCCTGGGTCAGCTCGACTCGATCTGCAGCGCGGGCGTGCTCAGCCTCGCCGTGCCGGCCGACCGGCCCTTCGCGACGGTCGCCACGGCCGACATCGCCGAGGCCGCGGCGACCCTGCTGACCGACCGGAGCTGGCGGGGCCACGACGACGTTCCTCTGTTCGGGCCGGACCGGCTCACGCCCGACCAGATGGCGGAGGTGATGAGCCAGGAGCTGGGCCGGCCGGTCGCCTACCGGCACGTCACCCTCGAGGAGCTCGCCGCGGGCATGCGCACCGCCGGTGCCGGCGGCCGGGCGGTGCGGGACACCACCGACGTCTTCGCGGCGCACGCCGGCGGCATCTACGACGCGGACTGGGCCGTGGCGCAGCTCGGGTCCGTCGACTTCGCCACCTGGTGCCGCACCGTGCTG
PROTEIN sequence
Length: 200
LGTDADDDAVRRHGTEHVVGISSAGHGWTEPAGVLSAAFAMDDELAGSGAAYRALSMPFYMENLLGQLDSICSAGVLSLAVPADRPFATVATADIAEAAATLLTDRSWRGHDDVPLFGPDRLTPDQMAEVMSQELGRPVAYRHVTLEELAAGMRTAGAGGRAVRDTTDVFAAHAGGIYDADWAVAQLGSVDFATWCRTVL