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SCN18_25_1_16_R2_B_scaffold_5478_2

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial_73_8

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 14 / 38 MC: 1
Location: 984..1565

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B64F95 similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 184.0
  • Bit_score: 266
  • Evalue 1.10e-68
TetR family transcriptional regulator {ECO:0000313|EMBL:AJE43605.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 183.0
  • Bit_score: 240
  • Evalue 1.20e-60
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 193.0
  • Bit_score: 118
  • Evalue 1.70e-24

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGACCACCGAGCGCCAGCCGCTGCGCGCGGACGCCCGTCGCAACCGCGAGGCGATCCTGGCTGCCGCCGCGGACCTGCTCGGGGCACGGGGTGACGACGCGCAGATGGAGGAGATCGCGTCGCACGCCGGCCTGGGCATCGGCACGGTGTACCGGCACTTCGCGGACAAGCGGTCGCTGGTCGCGGCGATCGTCGGCCGTCGTTTCGACGCAGCGACCGAGCTCGCCCTCGCGGCAGAGCAGCTGACCGACCCGACGGAGGCCTTCGAACGGCTGCTCTACGGCTACCTCGAGTCCGTGGAGGCGGACTCCGCGTTCCGGCGTGCGCTGCTCGGTCCGCAGGAGCCGCGTTGGGACGCCATCGCGGAGCAGAAGGCCGCGCTCGGCGCCGTCGTCGAGCGGATCGTCGCCCGTGCGGTCGAGGCCGGCGTGCTGCGGTCCGACTTCGACGCCGACGACTTCGTGCTGATCACCCGTGGGGCGATGGCCAACATGACCGCCGAGGGCCACTGGCGCCGCCACGTGCAGCTGCAGCTCCAGGGCGTTCGCCCCGTCCCGGGCGGCTCGACACCTGGCCCCTGA
PROTEIN sequence
Length: 194
MTTERQPLRADARRNREAILAAAADLLGARGDDAQMEEIASHAGLGIGTVYRHFADKRSLVAAIVGRRFDAATELALAAEQLTDPTEAFERLLYGYLESVEADSAFRRALLGPQEPRWDAIAEQKAALGAVVERIVARAVEAGVLRSDFDADDFVLITRGAMANMTAEGHWRRHVQLQLQGVRPVPGGSTPGP*