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SCN18_25_1_16_R2_B_scaffold_5478_3

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial_73_8

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 14 / 38 MC: 1
Location: comp(1579..2160)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000376647D similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 186.0
  • Bit_score: 236
  • Evalue 1.20e-59
Putative TetR-family transcriptional regulator {ECO:0000313|EMBL:EGD41848.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 188.0
  • Bit_score: 215
  • Evalue 4.00e-53
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 190.0
  • Bit_score: 203
  • Evalue 4.10e-50

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGCCCCCGCAGATGACCCGGCTGCGTGCGGACGCGCAGGAGAACCGCGACCGGATCCTCGCCGCGGCCGCCGAGCTGTTCGCGGAGCGCGGCCTGCACGTCGGGATGCGCGAGGTCGCGCGCCGGGCAGGCGTCGGGCCCGCGACGCTGTACCGGCGGTTCCCGACGCGCCAGGCGCTGGTCGACGAGGCGTTCTCGGCGGAGGTCGAGGCGTGCCGACGGATCGTCGAGGACGGCTGTGCTCAGGCGGACCCGTGGACGGGTCTCACGGAGGCGCTGCGAGGCCTGCTGGTGCTGAACGTGCGGAACCGGGGGTTCGTCGACGCCCTGCTGTCCACCATGCCGACGGGGGCGCTCGCGCAGCATCGTCGCGAGCTGCTCGGCCTGCTCGACGGTCTCGCGGCACGAGCCCGTGATGCCGGTCGGCTCCGGGCGGACTTCGTCATCGACGACCTGGTGCTGGTCCTGTCCGCCGGTCGGGGACTGGGTGCCGCGCGTCGCGAGCTGCTCCCGTCCGCCGCGCACCGCTTCGCCGACCTGGCGATCGACGCCCTCCGTGCCGACCCGGTCACTCCCCGCTGA
PROTEIN sequence
Length: 194
MPPQMTRLRADAQENRDRILAAAAELFAERGLHVGMREVARRAGVGPATLYRRFPTRQALVDEAFSAEVEACRRIVEDGCAQADPWTGLTEALRGLLVLNVRNRGFVDALLSTMPTGALAQHRRELLGLLDGLAARARDAGRLRADFVIDDLVLVLSAGRGLGAARRELLPSAAHRFADLAIDALRADPVTPR*