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SCN18_25_1_16_R2_B_scaffold_6152_2

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial_73_8

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 14 / 38 MC: 1
Location: comp(1156..2016)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase substrate binding domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H091_CELFA similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 285.0
  • Bit_score: 359
  • Evalue 3.10e-96
Shikimate dehydrogenase {ECO:0000313|EMBL:KGM01697.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 282.0
  • Bit_score: 368
  • Evalue 7.10e-99
Shikimate dehydrogenase substrate binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 285.0
  • Bit_score: 359
  • Evalue 8.70e-97

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Taxonomy

SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGTCGCAGGAGCGCAGGGCGGCCGTGCTCGGCCACCCGGTGGGCCACTCGCTGTCGCCGGTGCTGCACCGGGCCGCCTACGAGGCGCTCGGCCTGAGCGGATGGCGCTACGACGCGATCGACGTCACGGAGGACCAGCTCGCGGACGTCGTGGGCGCGCTGGACGGGACGTGGGCCGGCCTCTCGCTGACGATGCCGCTCAAGCAGACCGTCCTGCGCCTGCTCGACCACGTCGAGCCGCTGGCCGAGACGGTCGGGGCCGTCAACACCGTCCTGGTGCAGCCGGTCGGCCGCACGGTGGCCCTGACCGGCGCCAACACCGACGTGCACGGCATCGTCGCGGCGCTCCGGGAAGGCTTCGCCGTGGCGGGCGGCCACCTGCCCGTCGCACCGTCGGCGGCCGTGCTGGGCGCGGGCGCGACGGCGGCGTCGACGCTGGCGGCGCTCGGTGAGCTCGGGTGCACCGCGCCGATCGTCTACGTGCGGGCCGTCGGCCGGTCGGGGCCGCTGCAGCGCGCGGCCCACCGGATGGGCGTCAGCCCCGTCGTACGCACGCTGGACCGCGCGGGGGCGGAGATCGGCGGGGCCGACATCGTCGTCAGCACGCTGCCCGCCGGTGCCGCCGACGCCGTCGCGGACCAGCTCGCCGGCCGCCCCTCGGGCGTCCTGCTGGACGTCGTGTACGCACCGGCGCGCACCGCCCTCATCGCGGCGTGGGAGACCGCCGGGGGAGTGGCGGTGGGCGGCGCGAGGATGCTGCTGCACCAGGCGGCCGAGCAGGTGCGGCTGATGACGGGTCGTCCAGCGCCGCTCGCCGCGATGGACGTCGCGCCGCGGGACGCCCTCGCGGCGTCCGTCTGA
PROTEIN sequence
Length: 287
MSQERRAAVLGHPVGHSLSPVLHRAAYEALGLSGWRYDAIDVTEDQLADVVGALDGTWAGLSLTMPLKQTVLRLLDHVEPLAETVGAVNTVLVQPVGRTVALTGANTDVHGIVAALREGFAVAGGHLPVAPSAAVLGAGATAASTLAALGELGCTAPIVYVRAVGRSGPLQRAAHRMGVSPVVRTLDRAGAEIGGADIVVSTLPAGAADAVADQLAGRPSGVLLDVVYAPARTALIAAWETAGGVAVGGARMLLHQAAEQVRLMTGRPAPLAAMDVAPRDALAASV*