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SCN18_25_1_16_R2_B_scaffold_23162_1

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial_73_8

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 14 / 38 MC: 1
Location: 3..344

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 113.0
  • Bit_score: 204
  • Evalue 5.40e-50
DNA-directed RNA polymerase subunit alpha n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UIU7_CELFN similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 113.0
  • Bit_score: 203
  • Evalue 6.50e-50
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 113.0
  • Bit_score: 203
  • Evalue 1.90e-50

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Taxonomy

SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 342
CTCAACGTCGAGGCCGGGGGCATCGAGATCGGCCCGTCGCCGACGGACGCCGCGCTCGCCGCCGACCTGGCGCTGCCGATCGAGGACCTGCAGCTGACCATCCGGTCGTACAACTGCCTCAAGCGCGAGGGCATCCACACGGTGGGCGAGCTCGTCGCACGGTCCGAGGCCGACCTGCTCGACATCCGCAACTTCGGTGCGAAGTCCATCACCGAGGTCAAGGAGAAGCTGGCCGAGCTGGGACTGAGCCTGAAGGACAGCCCGATCGACTTCGACGCGACGGCCGGTGCCGGCTACTACGCCGACGACGAGGTCGACTTCAGCGAGGACGAGCAGTACTGA
PROTEIN sequence
Length: 114
LNVEAGGIEIGPSPTDAALAADLALPIEDLQLTIRSYNCLKREGIHTVGELVARSEADLLDIRNFGAKSITEVKEKLAELGLSLKDSPIDFDATAGAGYYADDEVDFSEDEQY*