ggKbase home page

SCN18_13_7_16_R5_B_scaffold_595_11

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(13108..13809)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ILQ4_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 233.0
  • Bit_score: 414
  • Evalue 3.90e-113
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:KFC70734.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 232.0
  • Bit_score: 441
  • Evalue 4.10e-121
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 233.0
  • Bit_score: 414
  • Evalue 1.10e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCCAACCATTGCGCTGGTCGACGACGACCGCAACATCCTGACGTCGGTCTCCATTGCACTCGAGGCCGAAGGTTACCGGATCCTGACCTATACCGACGGCGCCTCGGCGCTGGACGGGCTGAAGCAGAATCCGCCCGACCTCGCCATTTTCGACATCAAGATGCCGCGCATGGACGGGATGGAGCTGCTGCGCCGCCTGCGCCAGAAATCCGATCTGCCGGTGATCTTCCTAACCTCGAAGGACGAAGAGATCGACGAGCTCTTCGGCCTGAAGATGGGCGCCGACGACTTCATCCGGAAGCCGTTCTCGCAGCGCCTCCTGGTCGAGCGCGTCAAGGCGATCCTGCGTCGTGCCGGCGCCAAGGACGCCGCAGCGCCGGCCCGCACAGAGGACGCCAAGGCGCTCGAGCGCGGCCTGCTGCGCATGGACCCGGAGCGCCACACCTGCACCTGGAAGGGCGAGGCGGTGACGCTGACGGTGACAGAATTCCTGATCCTGCAGTCGCTGGCGCAGCGCCCGGGCGTGGTGAAGAGCCGCAACGCCCTGATGGATGCCGCCTATGACGACGAGGTCTATGTCGACGACCGCACGATCGACAGCCACATCAAGCGGCTGCGCAAGAAGTTCAACCAGGTCGATCCGGAGTTCGACATGATCGAGACGCTGTACGGCGTCGGCTATCGCTTCAAGGAGAGCTGA
PROTEIN sequence
Length: 234
MPTIALVDDDRNILTSVSIALEAEGYRILTYTDGASALDGLKQNPPDLAIFDIKMPRMDGMELLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFIRKPFSQRLLVERVKAILRRAGAKDAAAPARTEDAKALERGLLRMDPERHTCTWKGEAVTLTVTEFLILQSLAQRPGVVKSRNALMDAAYDDEVYVDDRTIDSHIKRLRKKFNQVDPEFDMIETLYGVGYRFKES*