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SCN18_13_7_16_R5_B_scaffold_1003_4

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 2727..3332

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU04_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 184.0
  • Bit_score: 159
  • Evalue 3.30e-36
Regulatory protein, TetR {ECO:0000313|EMBL:KFC75408.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 185.0
  • Bit_score: 176
  • Evalue 3.60e-41
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 184.0
  • Bit_score: 159
  • Evalue 9.30e-37

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GTGAAGCAGGACCCGGCCGGCAATCCGGCGAGCGGCCAGCGCCCGGAAGGCGGCGCGCGCCGCCAGATCCTCGACGCCGCCGCGGCTTTGCTCCGCCAGGGCTATGACGCCACGACGACGCGGGAGATCGCCGCCCGCGTCGGGATCAAGGCCGGCAGCATCTATCATCACTACCCGTCGAAGGAAGCGATCGTCAGTGCCGTCGTCAACGAGGGCGTGCGCGTCGTCCATGAGGCGGTGACGGGCGCGCTCGCGGCACTCGGGCCATCGGCATCGCCGCGCGAAAGGATGCAGGCGGCGATCAAGGCGCACCTGCTCTCCTCGCTCGAGCACAGCGCCTACACCTCGGCCAGCATCCGTGCCTTCGCCTTCCTGCCGGCCGCGGTCCAGGAGGACTGCCGCGTCGAGCGCCGACGCTATGAGGAAATCTGGCGCGGACTGGTGACGGAAGCCGCGGCAGCCGGGCTCCTCGCCCCGGACGTCTCGCAGGATGCGGTGCGTCTCCTCTTGCTCGGCGCGGTCAACTGGGCCGGTGAATGGTACCGGCCCGAACGCATGAGCATCGACGAGATCGCCCGCGACTTCGCCGCCAGCATCCTGCGCTGA
PROTEIN sequence
Length: 202
VKQDPAGNPASGQRPEGGARRQILDAAAALLRQGYDATTTREIAARVGIKAGSIYHHYPSKEAIVSAVVNEGVRVVHEAVTGALAALGPSASPRERMQAAIKAHLLSSLEHSAYTSASIRAFAFLPAAVQEDCRVERRRYEEIWRGLVTEAAAAGLLAPDVSQDAVRLLLLGAVNWAGEWYRPERMSIDEIARDFAASILR*