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SCN18_13_7_16_R5_B_scaffold_1086_8

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 7055..7369

Top 3 Functional Annotations

Value Algorithm Source
integration host factor subunit alpha n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E38615 similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 104.0
  • Bit_score: 171
  • Evalue 2.50e-40
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 104.0
  • Bit_score: 204
  • Evalue 6.50e-50
ihfA; integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 105.0
  • Bit_score: 165
  • Evalue 6.70e-39

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGGCAGGGCAAACTGTGACGCGCGCGGACCTGTGCGAGGCGGTCTATCAGAAGATCGGCCTGTCGCGGACGGAATCGTCCAAGCTCGTCGAAGCGGTCCTCGACGAGATCTGCGACGCCGTGGCGCGTGGCGAGAACGTCAAACTTTCTTCGTTCGGCTCCTTCGTCGTGCGCGACAAGGGCGAGCGAATCGGGCGTAATCCCAAGACTGGCGTAGAAGTTCCGATCGAGCCGCGTCGCGTGATGGTATTCAAGCCCTCGAACGTGATGAAGGCCCGGATCAACGGGCAGAATGGCGAGGGTGACGAGGAGTGA
PROTEIN sequence
Length: 105
MAGQTVTRADLCEAVYQKIGLSRTESSKLVEAVLDEICDAVARGENVKLSSFGSFVVRDKGERIGRNPKTGVEVPIEPRRVMVFKPSNVMKARINGQNGEGDEE*