ggKbase home page

SCN18_13_7_16_R5_B_scaffold_1260_5

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 3777..4940

Top 3 Functional Annotations

Value Algorithm Source
mandelate racemase n=1 Tax=Methylopila sp. M107 RepID=UPI00036412A3 similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 387.0
  • Bit_score: 711
  • Evalue 4.30e-202
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:EIM29732.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 387.0
  • Bit_score: 693
  • Evalue 1.00e-196
mandelate racemase/muconate lactonizing protein similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 386.0
  • Bit_score: 682
  • Evalue 4.70e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGCGCATCGTCGACGTCCGCGAGATCACGCAACCGATCGCCTCGCCGATCCGCAACGCCTATATCGACTTCTCGAAGATGACGACGAGCCTCGTCGCCGTCGTCACCGACGTCGTCCGCGACGGACGCCGCGTCGTCGGCTACGGCTTCAACTCGAATGGCCGCTACGGCCAGGGCGGACTGATCCGCGAACGCTTCGCGCCGCGCCTGCTGGAAGCCGAGGCGAAGAGCCTCGTCGACGAAACCGGCGACAATCTCGATCCCGATCACTGCTGGGCGGCGATGATGAAGAACGAGAAGCCGGGCGGCCATGGCGAGCGCTCGGTCGCCGTCGGCACGCTCGACATGGCGATCTGGGACGCCACCGCCAAGATCGCCGGCAAGCCGCTCTTCCGCCTGCTCGCCGAGCGCCATGGCCGGCAGGCCGATCCAAAGGTCTTCGTCTACGCCGCCGGCGGCTACTACTATCCCGGCAAGGACGACGATGCTCTGCGCGCCGAGATGCGCTCCTATCTCGACCGCGGCTATCGCGTCGTGAAGATGAAGATCGGCGGCGCCTCGCTCGCCGAAGATCGGCGCCGGATCGAGGCTGTGCTGGCCGAGATCGGTGGGGATGCGCAGCTCGCCGTCGACGCCAATGGCCGCTTCGACCTCGAGACCGCGATCGCCTATGCCAAGGCGCTGCGCGACTATCCGCTGTTCTGGTACGAGGAGGCGGGCGACCCGCTCGACTACGCCCTCCAGGCTGCCCTCGCCGAATTCTATCCCCGCCCGATGGCGACCGGCGAGAACCTGTTCAGCCATCAGGACGCGCGCAACCTCCTGCGCCATGGCGGCATGCGGCCGGATCGCGACTGGCTGCAATTCGACTGCGCCCTCTCCTACGGGCTCTGCGAATACCAGCGCACCCTCGCCGCGCTGAAGGTCGCCGGCTGGGGCTGGGACCGCTGCATCCCGCATGGCGGCCACCAGATGTCGCTCAACATCGCCGCTGGCCTCGGACTGGGCGGCAATGAGAGCTATCCCGACCTGTTCCAGCCTTATGGCGGCTTCCCTGACACGGTTCGGGTCGAAAACAGCTTCATCACCATGCCGGACCTGCCGGGCATCGGCTTTGAGGGCAAGTCCGACCTGATCAAGGTGATGCGCGAACTGGCGGAGTAG
PROTEIN sequence
Length: 388
MRIVDVREITQPIASPIRNAYIDFSKMTTSLVAVVTDVVRDGRRVVGYGFNSNGRYGQGGLIRERFAPRLLEAEAKSLVDETGDNLDPDHCWAAMMKNEKPGGHGERSVAVGTLDMAIWDATAKIAGKPLFRLLAERHGRQADPKVFVYAAGGYYYPGKDDDALRAEMRSYLDRGYRVVKMKIGGASLAEDRRRIEAVLAEIGGDAQLAVDANGRFDLETAIAYAKALRDYPLFWYEEAGDPLDYALQAALAEFYPRPMATGENLFSHQDARNLLRHGGMRPDRDWLQFDCALSYGLCEYQRTLAALKVAGWGWDRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDTVRVENSFITMPDLPGIGFEGKSDLIKVMRELAE*