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SCN18_13_7_16_R5_B_scaffold_1260_8

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(8008..8451)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DDE25 similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 146.0
  • Bit_score: 152
  • Evalue 2.90e-34
Sigma-24 subunit of RNA polymerase, ECF subfamily {ECO:0000313|EMBL:KEC81737.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 147.0
  • Bit_score: 147
  • Evalue 1.30e-32
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 144.0
  • Bit_score: 142
  • Evalue 6.60e-32

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
TATGCGATGACGCTGACGCGCTCGGCCAGCGAGGCCGACGATCTCGCGCAGGCGAGCTGCGAGTGGGCGCTGAAGGCGCAGGCGCAGTTTCAGGAGGGGACCAGGCTCGATGCCTGGCTGTTCAGCATCACGCGCAATCTCTGGATCGATGCGCTGCGCAAGCGCCAGCGCGAGGGGAGGGTCGAGGAGATCGACGCCCATCTCGATCTGCCGGGCGAGGATGGCCGGCAGGTGAACGAGGTCGCGCTGACCGTCGATTCCGTCCAGCAGGCGCTGGCGCAGATGCCGGAGGAGCATCGCCGGCTGCTGATGCTGATCTGCGTCGAGGGCTGCAGCTATCGCGACGCCTCGGAACGGCTGGCGATCCCGATCGGAACGGTAATGAGCCGCCTGTCGCGGGCGCGGCAGGGGCTCGCGGCAAGACTGGGAATGGAAGCGAAATGA
PROTEIN sequence
Length: 148
YAMTLTRSASEADDLAQASCEWALKAQAQFQEGTRLDAWLFSITRNLWIDALRKRQREGRVEEIDAHLDLPGEDGRQVNEVALTVDSVQQALAQMPEEHRRLLMLICVEGCSYRDASERLAIPIGTVMSRLSRARQGLAARLGMEAK*