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SCN18_13_7_16_R5_B_scaffold_1503_1

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(1..441)

Top 3 Functional Annotations

Value Algorithm Source
Transcription activator n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CMC0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 118.0
  • Bit_score: 79
  • Evalue 2.40e-12
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ44761.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 143.0
  • Bit_score: 90
  • Evalue 1.50e-15
transcription activator effector binding similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 134.0
  • Bit_score: 78
  • Evalue 1.50e-12

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGCGACACTCCAACCTGTGCATGATCGCCCTGGCGGCCTGCCTCACGACCCCCGTCGCCGTGCCGGCCCAGACCAGGGTCGCCCCGCCGGCCGGCGTCGAAAGCACGCCCTTGGCGCCGCCATCCGGAGCGGCTGCGCCGGCGCAGAACGCCCCTTCGACCCAGGCACAGCAAGGGCAGCCGGCGCAGGGCCAGACGTCGCCGGCCGAGCCGCAGCCGGTCCAGCCGCCGCCGACCCTGCCCACTCCGCTGCCGGCGCCGCCGGCGCAGCAGCAGACAGGCACGCCAAATCCGAACGCCACCCTCGCCGGCAAGCCCGGCGATCCATCCGATGTCGACGAGGTCACACTCACCGCCCGGCCGGTGCTCGCTTTGTCGGGCCAGGCGAGCTGGGACCAGGGCTTCCAGCGTCTCTCCGAGGGCATCAACCTGCTGCGCGCC
PROTEIN sequence
Length: 147
MRHSNLCMIALAACLTTPVAVPAQTRVAPPAGVESTPLAPPSGAAAPAQNAPSTQAQQGQPAQGQTSPAEPQPVQPPPTLPTPLPAPPAQQQTGTPNPNATLAGKPGDPSDVDEVTLTARPVLALSGQASWDQGFQRLSEGINLLRA