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SCN18_13_7_16_R5_B_scaffold_2821_3

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 2144..2935

Top 3 Functional Annotations

Value Algorithm Source
Probable type II secretory pathway, gspd-related protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XX15_RALSO similarity UNIREF
DB: UNIREF100
  • Identity: 30.4
  • Coverage: 184.0
  • Bit_score: 58
  • Evalue 7.90e-06
GSPD-like protein similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 184.0
  • Bit_score: 58
  • Evalue 2.20e-06
Probable type II secretory pathway, gspd-related protein {ECO:0000313|EMBL:CAD16010.1}; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.4
  • Coverage: 184.0
  • Bit_score: 58
  • Evalue 1.10e-05

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGGCATTTTTCACTTCGCCCGGGCGGGGCTCGCATGATCTGCGCCGCCGTCTCGCCGGGCTGGCCGTCGCGGCTGCGGCCCTGGCTTCGGCCGGCCCGGCGCTGGCCCAGATCGACGACTACGGCGGCGGCTACGCCTATTATAGTCGCGGCTACGATCGCGATTACGGCTATGAGCGGCGCTATGACTATGCGCCGCTGCCCGCCGCCCCGATCCCGCAGCGCGCCATCGGGCGGCTGGCGGCACGTGAATTCGGGCTCGTCCGCGTCGACCGCACGATCGCGACGCGCTCCTCCTATGTCGTCGACGGCGCTGGCCGCGATGGTGCCAGGGTGCGCCTGATCCTCGACCGCTTCAGCGGCGACCTGATCGACAGGATCGTGCTGGGAGCGCCGGCCCGCACCGCCCGGCTCGATCCGCAGATTGAGAGGCCGGCGCAGCGGCTGATACCGCGCCCGCCGCCGCGTCCGGCCGAATTGAAGCCGCCTGCCGAGGCGAGCGCTCCGGCGACCGTGGCGCCGCCTTTGCCGGTGGCGCCCGCCGCCCCGGTGGCGGTGCCGGCAAAGCCGCTCGCCGTGCCTGCCGTGGCACCCAAGGAGATCGGCAAGCCGACGCTGGTCAATCCCCAGGATGTCCGCAATGCCGACGGGCCGGAGCTGGCGCCGCCGCTGGCTCGTGCCCACCCGAGCGGAATCCCGGTGCCCGACACCACCGTGCCTCCGGTGCGGATCGAGGGGACCAAGGCGGAGGCGCCGAAATCGGACATGGTGCCGGTCGCGCCGCTGAACTGA
PROTEIN sequence
Length: 264
MAFFTSPGRGSHDLRRRLAGLAVAAAALASAGPALAQIDDYGGGYAYYSRGYDRDYGYERRYDYAPLPAAPIPQRAIGRLAAREFGLVRVDRTIATRSSYVVDGAGRDGARVRLILDRFSGDLIDRIVLGAPARTARLDPQIERPAQRLIPRPPPRPAELKPPAEASAPATVAPPLPVAPAAPVAVPAKPLAVPAVAPKEIGKPTLVNPQDVRNADGPELAPPLARAHPSGIPVPDTTVPPVRIEGTKAEAPKSDMVPVAPLN*