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SCN18_13_7_16_R5_B_scaffold_2604_5

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(4122..4943)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 273.0
  • Bit_score: 503
  • Evalue 1.40e-139
ribosomal protein S12 methylthiotransferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E7D9E5 similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 273.0
  • Bit_score: 442
  • Evalue 2.00e-121
rimO; 30S ribosomal protein S12 methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 273.0
  • Bit_score: 436
  • Evalue 5.40e-120

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
CCGATCGGTGAGGTGCTCCGCGAGGCCGAGAAGCTAGTCAAGGCCGGGGTCAAGGAACTCTCGGTGATCTCGCAGGACACCAGCGCCTACGGCCTCGACATCAAATACGCACCCTCGATGTGGAAGGATCGCGAGATCCGCACCCGTTTCTTCGAGCTGGCGCGCGAGCTCGGCCAGATGGGCATCTGGGTGCGCCTGCACTATGTCTACCCCTATCCGCATGTCGACGAGGTCATCCCGCTGATGGCGGAAGGGCACGTTCTGCCCTATCTCGACATCCCCTTCCAGCACGCTTCGCCGAGTGTGCTGAAGGCGATGCGTCGGCCGGCCCATCACGAGAAGACGCTGGAGCGCATCGGCAAATGGCGGGAAATCTGCCCCGATCTCGCCATTCGCTCGACCTTCATCGTCGGCTTCCCCGGCGAGACCGAGGAGGATGTGGATTTCCTGCTCGACTGGCTGAAGGAAGCGAAGCTCGAGCGCGTCGGCTGCTTCAAATACGAGCCGGTGAAGGGCGCCAAGGCCAATGATCTCGGCCTGCCCGCCATCGCCGAGGAGGAGAAGGAAGCGCGCTGGCACCGCTTCATGAAGACACAGGCGCTGGTCAGCGCCCGCCTTGCCAAGGCCAGGGTCGGCAAGCGCATTCCGGTGATCATCGACGAGGCCGGCCCGACGGTCGCCAAGGGCCGCTCGAAATGGGATGCGCCGGAGATCGACGGCAATGTCTATGTCGCGAGCCGGCGGCCGCTGCGGCCGGGCGACATCGTCACGGTCAAGGTCGAGCGCGCCGACGCCTATGACCTCCACGGGGTTGCGGTCTGA
PROTEIN sequence
Length: 274
PIGEVLREAEKLVKAGVKELSVISQDTSAYGLDIKYAPSMWKDREIRTRFFELARELGQMGIWVRLHYVYPYPHVDEVIPLMAEGHVLPYLDIPFQHASPSVLKAMRRPAHHEKTLERIGKWREICPDLAIRSTFIVGFPGETEEDVDFLLDWLKEAKLERVGCFKYEPVKGAKANDLGLPAIAEEEKEARWHRFMKTQALVSARLAKARVGKRIPVIIDEAGPTVAKGRSKWDAPEIDGNVYVASRRPLRPGDIVTVKVERADAYDLHGVAV*