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SCN18_13_7_16_R5_B_scaffold_2640_3

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 1018..1449

Top 3 Functional Annotations

Value Algorithm Source
PilT protein, N-terminal n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3H7_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 140.0
  • Bit_score: 164
  • Evalue 5.60e-38
PIN domain protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 143.0
  • Bit_score: 169
  • Evalue 3.70e-40
PilT protein, N-terminal {ECO:0000313|EMBL:ACM39425.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 140.0
  • Bit_score: 164
  • Evalue 7.80e-38

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
GTGACGATTTACCTTCTCGACGAAAATGTGCTGCGCGAGCTGCATCCGAAGGGCCACGCGCGCGTCCTCGCCTGGTATGCGACGGTATCGACGGATGATCTGCGGATCAGCGCCATGACCTTCTTCGAGAAGCGTCGCGGCGCTGAGCGCCTCGGTCGCACCGACCCGGATCGTGCCGCCACCATCCTCGAAGGCATCAAAGCGCTGGAGGCGGCCTACGGTTCCCGCGTTGTTCCGATCGACGGCCCCGTCGCCGGCGAATGGGCCAGGCTGCTCGGCGCGAAGGACAAGAACCAGCGCGACCGCGCTCTTGCTGCCACGGCCCGCGTCCACGGTTTTATTCTCGTCACGCGCAATGTCGATGACGTTCGCGGCTGCGATGTCGATGTGCTCGATCCATTCGCAGCGGAACCGCAGGTGCAGCGGGTCTGA
PROTEIN sequence
Length: 144
VTIYLLDENVLRELHPKGHARVLAWYATVSTDDLRISAMTFFEKRRGAERLGRTDPDRAATILEGIKALEAAYGSRVVPIDGPVAGEWARLLGAKDKNQRDRALAATARVHGFILVTRNVDDVRGCDVDVLDPFAAEPQVQRV*