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SCN18_13_7_16_R5_B_scaffold_2479_2

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 342..1973

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase LigC n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RMB7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 547.0
  • Bit_score: 790
  • Evalue 7.90e-226
ATP dependent DNA ligase {ECO:0000313|EMBL:KFC75502.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 543.0
  • Bit_score: 906
  • Evalue 1.40e-260
ATP dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 544.0
  • Bit_score: 784
  • Evalue 1.20e-224

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1632
ATGAACCGCTTCGCCTGGCTGCTCGACCGCCTCGCCTATGAGCCGCGCCGCAACGGCAAGCTCGCGCTGATCGCGGACTATCTGCGCACCACGCCCGATCCCGATCGCGGCTATGCGCTGGCGGCGATGACCGGCGGGCTGGTCTTCCAGAACGCCAAGCCCGGCCTGATCCGCGCGCTGATCGCCGAGCGCACCGATCCTGTCCTTTTCGCGCTCTCCTACGACTATGTCGGCGATCTCTCCGAGACGGTCGCGCTGATGTGGCCGGCTCGGCATGGCGCCAACGACGTGCCGCATCTGCCCGATGTCGTCGCCGGACTGCAAAAGTCCGGCAAGACCGAGATGCCGCGCCTGATCGCCTCCTGGCTCGACGCGCTCGACGAGACCGGGCGCTGGGCCCTGCTCAAGCTGATCACCGGCGCCCTGCGCATCGGCGTCTCGGCCCGCCTTGCCAAGACCGCCGCCGCGAGCCTCGGCGGCATTCCCGCCGACGAGGTCGAGCAGGTCTGGCATGGGCTGGAGCCGCCCTATACCGCGCTCTTCGCCTGGCTGGCGGGCAGGGGCCCACGCCCGGAAGCGAGTGCCCCCGCGCCATTCCGCCCGGTCATGCTCTCGCATGCGGTGGAGGATGGCGATTTCGACAAGCTCGATGCGGCCGAATTCGCCGCTGAATGGAAATGGGACGGCATCCGCGTCCAGGCCGTTGCCGGCACGAGACCCGATGGCGGCCGCACCGTTCGTCTCTATTCCCGCACCGGCGAGGATATCGGCGCAGCGTTCCCGGATCTCACCGAGGCGCTGGCGCAGGACGGCGCGCTCGACGGCGAATTGCTGGTCATGCGCGATGGCACCGTCCAGAGTTTCAACACCCTGCAGCAGCGGCTCAACCGCAAGCAGGTCACCGCGAAGATGCTCGCCGAGTTCCCGGCCCATATCCGCGTCTATGACCTTCTCGCCGAGGGCGACGAGGATCTGCGTGAGCTGAGCTATATGGAGCGGCGCGTCCGGCTCGAAGCTTTCCTCGGCAGGCTGGGGAGTACGCGCTTCGATCTTTCGCCGCGCATTCCGTTCGCCAGCTGGGAAGAGCTGACGGTGGCCCGCGCCGATTCTGCTTCCGCCGGAGCTGGAGGCGATGCGGAGGCCGTCGAGGGCTGCATGCTCAAGCGGCTTGATTCGCCCTATCTGCCGGGCAGGCCGAAGGGCTATTGGTACAAGTGGAAGCGCGATGCGCGGCTCGTCGACTGCGTGCTGATGTATGCCCAGCGCGGCCACGGCAAGCGCTCCTCCTTCTATTCCGACTATACTTTCGGCGTCTGGCGGGTCGGCGAGACAGGCGCGGACGAGCTCGTTCCTGTGGGAAAGGCCTATTTCGGCTTCACCGACGAGGAGCTGATCGAGATCGACCGCTATGTCCGCAAGAACACGGAGAATCGTTTCGGTCCGGTGCGCGAGGTCACGCACACGGCTGTGAGCGGCCTCGTCTTCGAAGTGGCCTTCGAGGGGTTGCAGCGCTCGACGCGGCACAAATCCGGCCTCGCCATGCGCTTTCCCCGGATCAGCCGCATCCGCTGGGACAAGCCGCCGGGCGAGGCCGACCGGATCGAGACGCTGGAGGCGCTGCTGCCGGGCTAG
PROTEIN sequence
Length: 544
MNRFAWLLDRLAYEPRRNGKLALIADYLRTTPDPDRGYALAAMTGGLVFQNAKPGLIRALIAERTDPVLFALSYDYVGDLSETVALMWPARHGANDVPHLPDVVAGLQKSGKTEMPRLIASWLDALDETGRWALLKLITGALRIGVSARLAKTAAASLGGIPADEVEQVWHGLEPPYTALFAWLAGRGPRPEASAPAPFRPVMLSHAVEDGDFDKLDAAEFAAEWKWDGIRVQAVAGTRPDGGRTVRLYSRTGEDIGAAFPDLTEALAQDGALDGELLVMRDGTVQSFNTLQQRLNRKQVTAKMLAEFPAHIRVYDLLAEGDEDLRELSYMERRVRLEAFLGRLGSTRFDLSPRIPFASWEELTVARADSASAGAGGDAEAVEGCMLKRLDSPYLPGRPKGYWYKWKRDARLVDCVLMYAQRGHGKRSSFYSDYTFGVWRVGETGADELVPVGKAYFGFTDEELIEIDRYVRKNTENRFGPVREVTHTAVSGLVFEVAFEGLQRSTRHKSGLAMRFPRISRIRWDKPPGEADRIETLEALLPG*