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SCN18_13_7_16_R5_B_scaffold_774_1

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 3..371

Top 3 Functional Annotations

Value Algorithm Source
Putative RND efflux transporter n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HY52_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 115.0
  • Bit_score: 157
  • Evalue 4.40e-36
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:KFC67255.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 118.0
  • Bit_score: 202
  • Evalue 2.90e-49
RND efflux transporter similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 115.0
  • Bit_score: 157
  • Evalue 1.30e-36

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATCATGATGGTCGACTTCGCGATCGAGCGCCGCCGCCATGGCGACGATGCCCTCTCGGCAATCCGCGAAGCCGCGCTGGTGCGCTTCCGGCCGATCATGATGACGAGTTTCGCCGCGATCTTCGGCGTGCTGCCGATCGCGCTGGGCGCCGGCGCCGGCGCCGAACTGCGCCAGCCGCTCGGCATCGCCGTGGTCGGCGGCCTCCTGGTTTCGCAGCTCCTGACGCTCTACATCACGCCGGTGATCTATTTCTACCTCGACAAGGTCGACAGCTGGATCGCCGGGCGCGGCCGCGGCGAGCCCGACGAAACGCCGGTCGATGCTGCACCGGTTGCCGTCCCGCAGGCCCTGCATCGCGCCGAGCGCTGA
PROTEIN sequence
Length: 123
IMMVDFAIERRRHGDDALSAIREAALVRFRPIMMTSFAAIFGVLPIALGAGAGAELRQPLGIAVVGGLLVSQLLTLYITPVIYFYLDKVDSWIAGRGRGEPDETPVDAAPVAVPQALHRAER*