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SCN18_13_7_16_R5_B_scaffold_3356_6

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 3898..4077

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 49.0
  • Bit_score: 87
  • Evalue 6.60e-15
rsmH; ribosomal RNA small subunit methyltransferase H (EC:2.1.1.199) similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 53.0
  • Bit_score: 66
  • Evalue 1.90e-09
16S rRNA methyltransferase n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003806BF5 similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 52.0
  • Bit_score: 70
  • Evalue 4.60e-10

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
GTGAAGCCGGCCGAAGGGGAGGTTGCCGTGCCGCATGTGCCGGTGCTGATGGAGGAGGCGCTCGACGCGCTCGCGCTGAAGCCGGGCGGCCGCTATCTCGACGGCACCTTCGGCGCTGGTGGCTATTCCCGCGCGCTGCTGATGCGTGAGCCGCAGGCGGAGCTTCTGGCGCTCGACCGC
PROTEIN sequence
Length: 60
VKPAEGEVAVPHVPVLMEEALDALALKPGGRYLDGTFGAGGYSRALLMREPQAELLALDR