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SCN18_13_7_16_R5_B_scaffold_3445_5

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(2868..4004)

Top 3 Functional Annotations

Value Algorithm Source
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 378.0
  • Bit_score: 684
  • Evalue 5.90e-194
selA; L-seryl-tRNA(Ser) selenium transferase SelA (EC:2.9.1.1) similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 379.0
  • Bit_score: 461
  • Evalue 2.20e-127
selenocysteine synthase n=1 Tax=Variovorax paradoxus RepID=UPI0003691E2E similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 378.0
  • Bit_score: 696
  • Evalue 8.20e-198

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1137
GGCCGCGCGCTGCTGGCCGATGCGGCGCTGCAGCGGCTGCTCGCGGTGATGACCTCGCCCAACAACCTCGAATACGACCTTGCCACCGGCAGCCGCGGCGACCGCGACTCGCTGGTCGAAGAGCTGCTGTGCGGCATCACCGGCGCCGAGGCCGCCACGGTGGTCAACAACAACGCCGCCGCCGTGCTGCTCACCATCGCGGCGCTGGCGCGCGAGCGCGAGGTGATCGTCTCGCGCGGCGAGCTGGTCGAGATCGGCGGCGCCTTCCGCATGCCCGACGTGATGGCCAGCGCGGGCGCGCGCATGGTCGAGGTCGGCACCACCAACCGCACGCATCCGCAGGACTACGAGCGCGCCATCAACGAGCGCACCGCGCTCGTGATGAAGGTGCACACCAGCAACTACGCGGTGCAGGGCTTCACCGCCGCCGTCGACGAAGCCACGCTCGCCGGCATCGCGCATGCGCGCGGCGTGCCGCTGGCCACCGACCTTGGCAGCGGCTCGCTGGTCGACCTTGCGCACTACGGCCTGCCGCGCGAGCCGCTGCCGCAGGAGATGCTCGCGGCCGGCTGCGACGTGGTCACCTTCTCGGGCGACAAGCTGCTGGGCGGGCCGCAGGCCGGGCTCATCGTGGGCAGCAGGGAAGCCGTGGGCCGCATCCGCAAGTTCCCGATGAAGCGCGCGCTGCGCATGAGCAAGCTGCCGCTGGCCGCGCTGGAAGCCACGCTTTCGCTGTACCTGCGCCCCGAACGCCTCGCGCGGGACCTGCCGACGCTGCGCCTGCTCACGCGGCCCGCCGATGCGATCCGCGAGATGGCCGAGTCGCTGAAGGCACCGCTGCAGGCCGCCGTGTCGCCACGCTTCACCGTCGAGGTGGTGCCGCTGCTCGGGCAGATCGGCTCGGGCTCACTGCCCGTCGAACGCCTGCCTTCGGCGGGCCTCGCGCTCGCGCCGGCAGGCACCTCGAAGAAAGGCATCGGCACCGCGCTCGATGCCCTGGCCACCGCGTTGCGCGGCCTGCCCCTGCCGGTGATCGGCCGCATCGCCGAAGACCGCCTGCTGCTCGACCTGCGCTGCCTGGAAGACAGCGCGCCCTTCACGGGCCAGCTCGACATCTTGCGCGAGCGGCTCCTGTAG
PROTEIN sequence
Length: 379
GRALLADAALQRLLAVMTSPNNLEYDLATGSRGDRDSLVEELLCGITGAEAATVVNNNAAAVLLTIAALAREREVIVSRGELVEIGGAFRMPDVMASAGARMVEVGTTNRTHPQDYERAINERTALVMKVHTSNYAVQGFTAAVDEATLAGIAHARGVPLATDLGSGSLVDLAHYGLPREPLPQEMLAAGCDVVTFSGDKLLGGPQAGLIVGSREAVGRIRKFPMKRALRMSKLPLAALEATLSLYLRPERLARDLPTLRLLTRPADAIREMAESLKAPLQAAVSPRFTVEVVPLLGQIGSGSLPVERLPSAGLALAPAGTSKKGIGTALDALATALRGLPLPVIGRIAEDRLLLDLRCLEDSAPFTGQLDILRERLL*