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SCN18_13_7_16_R5_B_scaffold_5969_2

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(950..1696)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKT9_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 237.0
  • Bit_score: 292
  • Evalue 4.00e-76
Transcriptional regulatory protein OmpR {ECO:0000313|EMBL:CEJ13056.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 250.0
  • Bit_score: 298
  • Evalue 7.80e-78
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 237.0
  • Bit_score: 292
  • Evalue 1.10e-76

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGAACGACACTGCCGCGAGCCCCGCGCCGCTCGGCTCGCCAGAGGCCCATATCCTCGTCGTCGATGACGATCCGCAGATCCGTTTCCTGGTCAGCCGCCTGCTCCGGGCCAATGGCTACCGCGTCAGCGCCGCCGCCGACGGCCGTGAGATGGCCGAAAGCCTGAAGGGGGCGCCGGTCGACCTGATCGTGCTCGACGTCATGCTGCCCGGAGCCTCCGGCTTCGAGCTCTGCAGCGAGCTGCGTCGCAGTTCCGCCGTCCCGGTGATCATGTTGACGGCGCGCGGCGAGGAAAACGACCGCATCTCGGGCCTCGATCTCGGCGCCGACGATTATCTCGCCAAGCCGTTCAGCCCCGGCGAGCTGGTCGCACGGATCAACGCCCTGATCCGGCGGGCCCGGCGGGCGGTCAGCCAGCCCGGTGCTGCCGCGGTGCGCAGCTATGGCTTCTCCGGTTGGACCCTCGACATCGTCCGCCGCGAACTGGTCGATCCGCAAGGCAGCGTCGTCGATCTCAGCACCGGCGAGTTCGACATGCTGCGCGCCTTCGTCGAGGCACCGGGCAAGGTGCTGTCGCGGGAGGCGCTGCTCGACATCGCCAAGAACCGCGTCGCCACCGGCTTCGACCGCGTCGTCGACGTGCAGATCAGCCGCCTGCGCAAGAAGATCGAGGCTGGCGGCGATGCCATGATCAAGACCGTGCGCGGCACCGGCTACATGTTCCTGCCGGAGGTCGAGCGTCGATGA
PROTEIN sequence
Length: 249
VNDTAASPAPLGSPEAHILVVDDDPQIRFLVSRLLRANGYRVSAAADGREMAESLKGAPVDLIVLDVMLPGASGFELCSELRRSSAVPVIMLTARGEENDRISGLDLGADDYLAKPFSPGELVARINALIRRARRAVSQPGAAAVRSYGFSGWTLDIVRRELVDPQGSVVDLSTGEFDMLRAFVEAPGKVLSREALLDIAKNRVATGFDRVVDVQISRLRKKIEAGGDAMIKTVRGTGYMFLPEVERR*