ggKbase home page

SCN18_13_7_16_R5_B_scaffold_3616_1

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(3..467)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035DC073 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 148.0
  • Bit_score: 226
  • Evalue 1.30e-56
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:KFC61547.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 155.0
  • Bit_score: 260
  • Evalue 1.10e-66
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 149.0
  • Bit_score: 198
  • Evalue 8.20e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGCAGCCGATTTCCGATCTCCTCGTCTTCGATTTCTCGACGCTGCTGCCGGGACCGCTCGCCAGCCTGTTCCTGGCCGAGGCGGGGGCAAGGATCATCAGGATCGAGCGGCCGGAGGGCGAGGATATGCGCCGCTTCCCGCCACGGCTCGGCGAGACCTCGGCGCCGTTCGCGGCGCTCAATCGCGGCAAGACCAGCCTCGCCATCGACCTGAAGGCTCCCGATGCGTTGGAGCGACTGCGCCCGCTGATCGAGAAGGCCGACATCCTGATCGAGCAGTTCCGGCCGGGCGTGATGGCGCGGCTGGGCTTCGGCTTTGAAGCCATGCGCGCGATCAACCCGCGGCTGATCTATTGCTCGATCAGCGGCTACGGCCAGGAAGGACCGCGCGCCTTCGAGGCCGGGCACGACATCAACTACCAGGCGATAGGCGGGTTGCTCGGCCAGTCGCTGAAGCGCGGTGAG
PROTEIN sequence
Length: 155
MQPISDLLVFDFSTLLPGPLASLFLAEAGARIIRIERPEGEDMRRFPPRLGETSAPFAALNRGKTSLAIDLKAPDALERLRPLIEKADILIEQFRPGVMARLGFGFEAMRAINPRLIYCSISGYGQEGPRAFEAGHDINYQAIGGLLGQSLKRGE